CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052893_P002	Maize	nucleus	71.19	66.04
Os08t0510500-01	Rice	nucleus	48.47	52.57
EER96978	Sorghum	nucleus	46.78	35.03
EES14911	Sorghum	nucleus	42.03	27.02
OQU89150	Sorghum	nucleus	38.31	24.89
KXG35268	Sorghum	mitochondrion, nucleus	32.54	15.51
EER94188	Sorghum	cytosol	16.61	8.18

Protein Annotations

Gene3D:1.10.1240.40	MapMan:35.1	UniProt:C5YIQ7	EnsemblPlants:EES15392	ProteinID:EES15392	ProteinID:EES15392.2
InterPro:EMSY-LIKE_plant	InterPro:ENT_dom	InterPro:ENT_dom-like_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004674
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605
GO:GO:0009607	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0050832	InterPro:IPR005491	PFAM:PF03735	PFscan:PS51138	PANTHER:PTHR33432	PANTHER:PTHR33432:SF4
SMART:SM01191	EnsemblPlantsGene:SORBI_3007G209600	SUPFAM:SSF158639	UniParc:UPI00081ACCBC	:	:

Description

hypothetical protein

Coordinates

chr7:-:63837229..63841320

Molecular Weight (calculated)

33332.6 Da

IEP (calculated)

6.857

GRAVY (calculated)

-0.651

Length

295 amino acids

Sequence
(BLAST)

001: MEYRAFDSSV TGDELPPAYQ IRGPRVHFSG NGRSLAGTLS QPRSHIKLDS DIHQIEQQAY TGVLRAFKMQ SDALTWEKES LITELRRELK VSDVEHRMLL
101: NMVNEEEAVH RIRQSRQGGG MQSSLPHNSI VDHNHGPLKR QKKSHSMYSL PVDPHSPVMP LQAIMGNKTY RLAPENTRRD SVYQTLPNQG GWLAFDGVMK
201: GMDGRSGRYH ADEYYASPNN MGLLSFNHID IPNTESLVKK VESVLSDPDV YRIERAKKLL INQEQSLLDA IAKLDEASDH ENDDMMLVGS RITIG

Best Arabidopsis Sequence Match ( AT5G13020.3 )
(BLAST)

001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEVIMISVFL LV

Arabidopsis Description

EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.