Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82960 | Canola | cytosol, mitochondrion | 92.07 | 92.07 |
| KRG97103 | Soybean | cytosol | 86.69 | 86.93 |
| KRH03601 | Soybean | cytosol | 86.12 | 86.36 |
| Solyc02g068750.1.1 | Tomato | cytosol | 84.14 | 85.84 |
| PGSC0003DMT400027091 | Potato | cytosol | 83.85 | 85.55 |
| GSMUA_Achr7P10790_001 | Banana | cytosol | 83.57 | 85.01 |
| VIT_00s2082g00010.t01 | Wine grape | cytosol | 34.84 | 81.46 |
| CDX79172 | Canola | cytosol | 93.48 | 78.01 |
| Bra013635.1-P | Field mustard | cytosol | 91.78 | 76.42 |
| CDY67122 | Canola | endoplasmic reticulum, extracellular | 29.46 | 74.82 |
| OQU77586 | Sorghum | plastid | 79.89 | 74.02 |
| Zm00001d037675_P001 | Maize | extracellular | 78.75 | 72.97 |
| TraesCS1A01G123600.1 | Wheat | plastid | 78.47 | 72.7 |
| TraesCS1D01G130800.1 | Wheat | plastid | 78.47 | 72.7 |
| TraesCS1B01G143400.1 | Wheat | plastid | 78.19 | 72.44 |
| HORVU1Hr1G028330.1 | Barley | cytosol, extracellular, mitochondrion, plastid | 77.9 | 63.81 |
| Bra020834.1-P | Field mustard | nucleus | 16.71 | 60.2 |
| GSMUA_Achr10P... | Banana | cytosol | 75.07 | 59.55 |
| AT2G45270.1 | Thale cress | plastid | 23.23 | 17.08 |
Protein Annotations
| MapMan:16.6.2.2.1 | Gene3D:3.30.420.40 | EntrezGene:828368 | ProteinID:AEE84643.1 | ProteinID:AEE84644.1 | ArrayExpress:AT4G22720 |
| EnsemblPlantsGene:AT4G22720 | RefSeq:AT4G22720 | TAIR:AT4G22720 | RefSeq:AT4G22720-TAIR-G | EnsemblPlants:AT4G22720.1 | TAIR:AT4G22720.1 |
| EMBL:AY050841 | EMBL:AY079379 | EMBL:AY088084 | Unigene:At.1865 | ProteinID:CAA16557.1 | ProteinID:CAB79227.1 |
| GO:GO:0000408 | GO:GO:0002949 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0008033 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016746 |
| GO:GO:0016747 | GO:GO:0046872 | GO:GO:0061711 | InterPro:Gcp-like_dom | InterPro:KAE1/TsaD | InterPro:Kae1/OSGEP |
| HAMAP:MF_01446 | RefSeq:NP_194003.1 | RefSeq:NP_974593.1 | UniProt:O49653 | PFAM:PF00814 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00789 | PANTHER:PTHR11735 | PANTHER:PTHR11735:SF14 | SUPFAM:SSF53067 | TIGRFAMs:TIGR00329 | UniParc:UPI00000A46BF |
Description
Probable tRNA N6-adenosine threonylcarbamoyltransferase [Source:UniProtKB/TrEMBL;Acc:O49653]
Coordinates
chr4:+:11936942..11938969
Molecular Weight (calculated)
38769.9 Da
IEP (calculated)
5.812
GRAVY (calculated)
-0.045
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKKMIAIGF EGSANKIGVG IVTLDGTILA NPRHTYITPP GHGFLPRETA HHHLDHVLPL VKSALETSQV TPEEIDCICY TKGPGMGAPL QVSAIVVRVL
101: SQLWKKPIVA VNHCVAHIEM GRVVTGADDP VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR VLKLSNDPSP GYNIEQLAKK GENFIDLPYA
201: VKGMDVSFSG ILSYIETTAE EKLKNNECTP ADLCYSLQET VFAMLVEITE RAMAHCDKKD VLIVGGVGCN ERLQEMMRTM CSERDGKLFA TDDRYCIDNG
301: AMIAYTGLLA FVNGIETPIE DSTFTQRFRT DEVHAVWREK EAVLLGDKKV AAN
101: SQLWKKPIVA VNHCVAHIEM GRVVTGADDP VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR VLKLSNDPSP GYNIEQLAKK GENFIDLPYA
201: VKGMDVSFSG ILSYIETTAE EKLKNNECTP ADLCYSLQET VFAMLVEITE RAMAHCDKKD VLIVGGVGCN ERLQEMMRTM CSERDGKLFA TDDRYCIDNG
301: AMIAYTGLLA FVNGIETPIE DSTFTQRFRT DEVHAVWREK EAVLLGDKKV AAN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.