Factsheet for GSMUA_Achr10P26500_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P10080_001
GSMUA_Achr2P05100_001
GSMUA_Achr2P18260_001
GSMUA_Achr3P13440_001
GSMUA_Achr4P01930_001
GSMUA_Achr5P16460_001
GSMUA_Achr6P21250_001
GSMUA_Achr7P05200_001
GSMUA_Achr7P16090_001
GSMUA_Achr7P19340_001
GSMUA_Achr8P05370_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22720.1	GSMUA_Achr10P...	AT2G25000.1	21798944
AT4G22720.1	GSMUA_Achr10P...	AT2G25000.1	21798944
AT4G22720.1	GSMUA_Achr11P...	AT2G25000.1	21798944
AT4G22720.1	GSMUA_Achr1P10080_001	AT2G25000.1	21798944
AT4G22720.1	GSMUA_Achr2P05100_001	AT2G25000.1	21798944
AT4G22720.1	GSMUA_Achr3P13440_001	AT2G25000.1	21798944
AT4G22720.1	GSMUA_Achr4P01930_001	AT2G25000.1	21798944
AT4G22720.1	GSMUA_Achr5P16460_001	AT2G25000.1	21798944
AT4G22720.1	GSMUA_Achr7P05200_001	AT2G25000.1	21798944
AT4G22720.1	GSMUA_Achr7P16090_001	AT2G25000.1	21798944
AT4G22720.1	GSMUA_Achr7P19340_001	AT2G25000.1	21798944
AT4G22720.1	GSMUA_Achr8P05370_001	AT4G00980.1	21798944
AT4G22720.1	GSMUA_Achr11P...	AT5G06780.1	21798944
AT4G22720.1	GSMUA_Achr6P21250_001	AT5G19150.1	21798944
AT4G22720.1	GSMUA_Achr2P18260_001	AT5G51110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P10790_001	Banana	cytosol	65.39	83.86
VIT_05s0102g00570.t01	Wine grape	cytosol	33.48	79.26
KRH03601	Soybean	cytosol	60.67	76.7
KRG97103	Soybean	cytosol	60.45	76.42
AT4G22720.1	Thale cress	cytosol	59.55	75.07
Solyc02g068750.1.1	Tomato	cytosol	57.98	74.57
PGSC0003DMT400027091	Potato	cytosol	57.75	74.28
CDX82960	Canola	cytosol, mitochondrion	58.2	73.37
OQU77586	Sorghum	plastid	58.65	68.5
Zm00001d037675_P001	Maize	extracellular	57.75	67.45
TraesCS1A01G123600.1	Wheat	plastid	56.85	66.4
TraesCS1B01G143400.1	Wheat	plastid	56.63	66.14
TraesCS1D01G130800.1	Wheat	plastid	56.63	66.14
CDX79172	Canola	cytosol	58.2	61.23
Bra013635.1-P	Field mustard	cytosol	57.98	60.85
HORVU1Hr1G028330.1	Barley	cytosol, extracellular, mitochondrion, plastid	57.08	58.93
CDY67122	Canola	endoplasmic reticulum, extracellular	17.08	54.68
Bra020834.1-P	Field mustard	nucleus	11.91	54.08
GSMUA_Achr10P...	Banana	plastid	11.91	17.73
GSMUA_Achr10P...	Banana	cytosol	6.07	16.56

Protein Annotations

MapMan:16.6.2.2.1	Gene3D:3.30.420.40	GO:GO:0000408	GO:GO:0002949	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	GO:GO:0046872	GO:GO:0061711	EnsemblPlantsGene:GSMUA_Achr10G26500_001	EnsemblPlants:GSMUA_Achr10P26500_001
EnsemblPlants:GSMUA_Achr10T26500_001	InterPro:Gcp-like_dom	InterPro:KAE1/TsaD	InterPro:Kae1/OSGEP	UniProt:M0RLM4	HAMAP:MF_01446
PFAM:PF00814	PRINTS:PR00789	PANTHER:PTHR11735	PANTHER:PTHR11735:SF14	SUPFAM:SSF53067	UniParc:UPI0002953204
SEG:seg	:	:	:	:	:

Description

Probable O-sialoglycoprotein endopeptidase [Source:GMGC_GENE;Acc:GSMUA_Achr10G26500_001]

Coordinates

chr10:+:30025112..30028541

Molecular Weight (calculated)

48971.9 Da

IEP (calculated)

7.585

GRAVY (calculated)

0.214

Length

445 amino acids

Sequence
(BLAST)

001: MAAKKTLIAV GFEGSANKIG VGLVVLDGTI LSNPRHTYIT PSGHGFLPRE TAHHHLRHLL PLLRSALSGA GITRADVDCL CYTKGPSIGA PLQVSAVAAV
101: RALSQLWEKP IVAVNHCVAH IEMGRVVTGA EDPVVLCVSR GNTLISYSEG KYRIFGGTID IAVGNCLDRF AGVFTLSNDP SPGYNIEQVC SLYFCFKNAR
201: CVIHVERIIH VYLICNLGFS MLKIVVTYYR VKGSAIILCT YDLPTVKGVK FMDLPYVVKG MNVSFSGILS YIEATAVEKL KNNECTPADL CYSVQETVCA
301: MLVEIIERAM AHCDKKDVLI VGGVGCNDRL QELMRVMCSE RGGKLFATDD RYCIDNGAMI AYTGLLAFAH GMTTPLEEST FTQRVANFKE KLTLKEEQYR
401: HHNPCLEAPI SHQSVIYIAS LAFAQMLLYC YHGDMWYPYS LTNIN

Best Arabidopsis Sequence Match ( AT4G22720.2 )
(BLAST)

001: MKKKMIAIGF EGSANKIGVG IVTLDGTILA NPRHTYITPP GHGFLPRETA HHHLDHVLPL VKSALETSQV TPEEIDCICY TKGPGMGAPL QVSAIVVRVL
101: SQLWKKPIVA VNHCVAHIEM GRVVTGADDP VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR VLKLSNDPSP GYNIEQLAKK GENFIDLPYA
201: VKGMDVSFSG ILSYIETTAE EKLKNNECTP ADLCYSLQET VFAMLVEITE RAMAHCDKKD VLIVGGVGCN ERLQEMMRTM CSERDGKLFA TDDRYCIDNG
301: AMIAYTGLLA FVNGIETPIE DSTFTQRFRT DEVHAVWREK EAVLLGDKKV AAN

Arabidopsis Description

Probable tRNA N6-adenosine threonylcarbamoyltransferase [Source:UniProtKB/TrEMBL;Acc:O49653]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.