Factsheet for Bra020834.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra006496.1-P
Bra009226.1-P
Bra010220.1-P
Bra023708.1-P
Bra029188.1-P
Bra037396.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22720.1	Bra010220.1-P	AT2G25000.1	21798944
AT4G22720.1	Bra037396.1-P	AT4G00980.1	21798944
AT4G22720.1	Bra009226.1-P	AT5G06780.1	21798944
AT4G22720.1	Bra006496.1-P	AT5G19150.1	21798944
AT4G22720.1	Bra023708.1-P	AT5G19150.1	21798944
AT4G22720.1	Bra029188.1-P	AT5G51110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82960	Canola	cytosol, mitochondrion	61.22	17.0
AT4G22720.1	Thale cress	cytosol	60.2	16.71
GSMUA_Achr7P10790_001	Banana	cytosol	55.1	15.56
KRG97103	Soybean	cytosol	54.08	15.06
KRH03601	Soybean	cytosol	53.06	14.77
Solyc02g068750.1.1	Tomato	cytosol	50.0	14.16
PGSC0003DMT400027091	Potato	cytosol	50.0	14.16
Bra013635.1-P	Field mustard	cytosol	58.16	13.44
TraesCS1B01G143400.1	Wheat	plastid	48.98	12.6
TraesCS1D01G130800.1	Wheat	plastid	47.96	12.34
TraesCS1A01G123600.1	Wheat	plastid	47.96	12.34
Zm00001d037675_P001	Maize	extracellular	46.94	12.07
OQU77586	Sorghum	plastid	46.94	12.07
GSMUA_Achr10P...	Banana	cytosol	54.08	11.91
HORVU1Hr1G028330.1	Barley	cytosol, extracellular, mitochondrion, plastid	47.96	10.9
Bra004895.1-P	Field mustard	mitochondrion	16.33	3.34
CDY67122	Canola	endoplasmic reticulum, extracellular	1.02	0.72
VIT_00s2082g00010.t01	Wine grape	cytosol	1.02	0.66

Protein Annotations

EnsemblPlants:Bra020834.1	EnsemblPlants:Bra020834.1-P	EnsemblPlantsGene:Bra020834	Gene3D:3.30.420.40	GO:GO:0000408	GO:GO:0002949
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	InterPro:Gcp-like_dom	InterPro:Kae1/OSGEP	PANTHER:PTHR11735	PANTHER:PTHR11735:SF14	UniParc:UPI0002545E19
UniProt:M4DWE0	MapMan:35.2	:	:	:	:

Description

AT4G22720 (E=3e-027) | glycoprotease M22 family protein

Coordinates

chrA08:+:11799960..11800256

Molecular Weight (calculated)

11082.4 Da

IEP (calculated)

11.034

GRAVY (calculated)

-0.715

Length

98 amino acids

Sequence
(BLAST)

1: MKKRKIAIRF EGSANKIGIG IVTSDGTILA NPRHTYITPP GHGFLPRETA HHHLHHVFPL LSKHPNETPK RSKVPAWERR CKSQPLASEY YHSSGRSL

Best Arabidopsis Sequence Match ( AT4G22720.2 )
(BLAST)

001: MKKKMIAIGF EGSANKIGVG IVTLDGTILA NPRHTYITPP GHGFLPRETA HHHLDHVLPL VKSALETSQV TPEEIDCICY TKGPGMGAPL QVSAIVVRVL
101: SQLWKKPIVA VNHCVAHIEM GRVVTGADDP VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR VLKLSNDPSP GYNIEQLAKK GENFIDLPYA
201: VKGMDVSFSG ILSYIETTAE EKLKNNECTP ADLCYSLQET VFAMLVEITE RAMAHCDKKD VLIVGGVGCN ERLQEMMRTM CSERDGKLFA TDDRYCIDNG
301: AMIAYTGLLA FVNGIETPIE DSTFTQRFRT DEVHAVWREK EAVLLGDKKV AAN

Arabidopsis Description

Probable tRNA N6-adenosine threonylcarbamoyltransferase [Source:UniProtKB/TrEMBL;Acc:O49653]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.