Factsheet for Bra004895.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74720	Canola	mitochondrion, plastid	98.54	98.54
CDY20454	Canola	mitochondrion	54.7	86.18
AT2G45270.1	Thale cress	plastid	81.63	81.46
Solyc05g050940.2.1	Tomato	mitochondrion, plastid	66.81	70.64
PGSC0003DMT400018067	Potato	mitochondrion, plastid	67.22	68.66
VIT_15s0048g00390.t01	Wine grape	mitochondrion	67.01	68.59
Os12t0485000-02	Rice	plastid	61.8	64.21
HORVU3Hr1G029020.4	Barley	plastid	61.38	63.91
TraesCS3D01G149500.1	Wheat	plastid	61.17	63.83
TraesCS3B01G166200.1	Wheat	plastid	61.17	63.83
OQU86762	Sorghum	plastid	62.42	63.75
TraesCS3A01G133300.1	Wheat	plastid	60.96	63.62
TraesCS5B01G082600.1	Wheat	plastid	60.75	63.26
TraesCS5B01G083500.1	Wheat	plastid	59.92	62.39
TraesCS5A01G076800.1	Wheat	plastid	59.92	62.39
GSMUA_Achr10P...	Banana	plastid	38.2	61.2
TraesCS5D01G090000.1	Wheat	plastid	60.13	59.88
Zm00001d040583_P001	Maize	cytosol, plastid	40.71	55.71
Zm00001d040582_P002	Maize	plastid	23.38	53.08
Os01t0295900-01	Rice	mitochondrion	20.46	49.75
KRH76215	Soybean	cytosol	32.15	47.53
Bra013635.1-P	Field mustard	cytosol	18.58	20.99
Bra020834.1-P	Field mustard	nucleus	3.34	16.33

Protein Annotations

MapMan:16.6.2.3	Gene3D:3.30.420.40	EnsemblPlantsGene:Bra004895	EnsemblPlants:Bra004895.1	EnsemblPlants:Bra004895.1-P	GO:GO:0000003
GO:GO:0002949	GO:GO:0003674	GO:GO:0003824	GO:GO:0004222	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006139
GO:GO:0006508	GO:GO:0007275	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009790
GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	GO:GO:0061711	InterPro:Gcp-like_dom
InterPro:KAE1/TsaD	UniProt:M4CL09	HAMAP:MF_01445	PFAM:PF00814	PRINTS:PR00789	PANTHER:PTHR11735
PANTHER:PTHR11735:SF6	SUPFAM:SSF53067	TIGRFAMs:TIGR00329	TIGRFAMs:TIGR03723	InterPro:TsaD	UniParc:UPI0002547F11
SEG:seg	:	:	:	:	:

Description

AT2G45270 (E=1e-225) | glycoprotease M22 family protein

Coordinates

chrA05:+:2349797..2352347

Molecular Weight (calculated)

52376.9 Da

IEP (calculated)

8.658

GRAVY (calculated)

-0.185

Length

479 amino acids

Sequence
(BLAST)

001: MVRRFLTLSP VISRLNLNPG IFLAASPSLR LQRQNLKPKI SIISPSSAST FQRTRAYTTR TRGSSSLPRS ESWKLDDDGL VVLGIETSGD DTAAAVVRGN
101: GEILSQVISS QAELLAQYGG VAPKQAEEAH SRVIDKVVQD ALDRANLTEK DLAAVAVTIG PGLGLCLRVG VQKARRVAGA FNLPIVGVHH MEAHALVARL
201: VEHELSFPFM ALLISGGHNI IVLAHELGQY TQLGTTVDDA IGEAFDKTAK WLGLDLRRSG GPAVEQLALE GDSKSVMFNV PMKNHKDCNF SYAGLKTQVR
301: LAIEAREIDA KCPVSSATKE DRRNRADIAA SFQRVAVLHL EEKCERAIDW ALKLEPCIKH MVVSGGVASN QYVRSRLNNI VENKNLKLVC PPPSLCTDNG
401: VMVAWTGLEH FRVGRFDPPP PAIEPDDYVY DLRPRWPLGE EYAQGRSEAR SLRTARVHPS LTSIIRAADS LHQQTQTSQ

Best Arabidopsis Sequence Match ( AT2G45270.1 )
(BLAST)

001: MVRLFLTLSP AISRFNLYPG ISILARNNNS LRLQKHHKLK TKTPTFSLIS PSSSPNFQRT RFYSTETRIS SLPYSENPNF DDNLVVLGIE TSCDDTAAAV
101: VRGNGEILSQ VISSQAELLV QYGGVAPKQA EEAHSRVIDK VVQDALDKAN LTEKDLSAVA VTIGPGLSLC LRVGVRKARR VAGNFSLPIV GVHHMEAHAL
201: VARLVEQELS FPFMALLISG GHNLLVLAHK LGQYTQLGTT VDDAIGEAFD KTAKWLGLDM HRSGGPAVEE LALEGDAKSV KFNVPMKYHK DCNFSYAGLK
301: TQVRLAIEAK EIDAKCPVSS ATNEDRRNRA DIAASFQRVA VLHLEEKCER AIDWALELEP SIKHMVISGG VASNKYVRLR LNNIVENKNL KLVCPPPSLC
401: TDNGVMVAWT GLEHFRVGRY DPPPPATEPE DYVYDLRPRW PLGEEYAKGR SEARSMRTAR IHPSLTSIIR ADSLQQQTQT

Arabidopsis Description

GCP1Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22145]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.