Factsheet for HORVU3Hr1G029020.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
plastid 5
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion, peroxisome, plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G149500.1	Wheat	plastid	95.22	95.42
TraesCS3B01G166200.1	Wheat	plastid	95.0	95.21
TraesCS3A01G133300.1	Wheat	plastid	94.13	94.34
Os12t0485000-02	Rice	plastid	81.74	81.56
OQU86762	Sorghum	plastid	81.3	79.74
KRH65326	Soybean	plastid	64.57	66.74
Zm00001d040583_P001	Maize	cytosol, plastid	50.0	65.71
CDY20454	Canola	mitochondrion	43.04	65.13
GSMUA_Achr10P...	Banana	plastid	41.74	64.21
Solyc05g050940.2.1	Tomato	mitochondrion, plastid	62.17	63.13
VIT_15s0048g00390.t01	Wine grape	mitochondrion	63.7	62.61
CDX74720	Canola	mitochondrion, plastid	64.57	62.0
Bra004895.1-P	Field mustard	mitochondrion	63.91	61.38
CDY18936	Canola	mitochondrion, plastid	63.7	61.3
PGSC0003DMT400018067	Potato	mitochondrion, plastid	62.39	61.19
Os01t0295900-01	Rice	mitochondrion	25.87	60.41
AT2G45270.1	Thale cress	plastid	62.83	60.21
KRH76215	Soybean	cytosol	31.96	45.37
KRH65783	Soybean	nucleus	13.04	31.58
HORVU1Hr1G028330.1	Barley	cytosol, extracellular, mitochondrion, plastid	20.65	22.04

Protein Annotations

MapMan:16.6.2.3	Gene3D:3.30.420.40	EMBL:AK373528	UniProt:F2EBK3	GO:GO:0000003	GO:GO:0002949
GO:GO:0003674	GO:GO:0003824	GO:GO:0004222	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006139	GO:GO:0006508
GO:GO:0007275	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009790	GO:GO:0009791
GO:GO:0009793	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	GO:GO:0061711	InterPro:Gcp-like_dom	EnsemblPlantsGene:HORVU3Hr1G029020
EnsemblPlants:HORVU3Hr1G029020.4	InterPro:KAE1/TsaD	HAMAP:MF_01445	PFAM:PF00814	PRINTS:PR00789	PANTHER:PTHR11735
PANTHER:PTHR11735:SF6	SUPFAM:SSF53067	SignalP:SignalP-noTM	TIGRFAMs:TIGR00329	TIGRFAMs:TIGR03723	InterPro:TsaD
UniParc:UPI00020085B8	SEG:seg	:	:	:	:

Description

Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:F2EBK3]

Coordinates

chrchr3H:-:132109095..132118380

Molecular Weight (calculated)

49910.1 Da

IEP (calculated)

6.843

GRAVY (calculated)

-0.030

Length

460 amino acids

Sequence
(BLAST)

001: MVLTLLPTLS LPVSRATAFL LGTPLKSFRS HHPLLRSLLA SASSLSAPPT ARSLITMASA SIPARRDLLM LGIETSCDDT AAAVVRGDGE ILSQVIASQS
101: DLLVKWGGVA PKMAEEAHAL AIDQVVQKAL DDANVSESDL SAVAVTIGPG LSLCLRVGVH KARNIAKVFR LPIVGVHHME AHALVSRLVN KNLDYPFLAL
201: LISGGHNLLV LAQNLGEYVQ LGTTIDDAIG EAYDKSARWL GLDIRKGGGP ALEELALEGD PNSINFRVPM RQHKDCNFSY AGLKTQVRLA IESRNLRTDD
301: IPISSATEED RQLRANIAAS FQRIAVLHLE DRCQRAVEWA LKLEPSIKHF VVSGGVASNQ YVRARLNDIA EKNGLQLVSP PPSLCTDNGV MIAWTGIEHF
401: VAGRFEDPPL ADEPDDMQYD LRPRWPLGEE YAEGRSVSRS LKTARIHPSL TSMTQSSLRS

Best Arabidopsis Sequence Match ( AT2G45270.1 )
(BLAST)

001: MVRLFLTLSP AISRFNLYPG ISILARNNNS LRLQKHHKLK TKTPTFSLIS PSSSPNFQRT RFYSTETRIS SLPYSENPNF DDNLVVLGIE TSCDDTAAAV
101: VRGNGEILSQ VISSQAELLV QYGGVAPKQA EEAHSRVIDK VVQDALDKAN LTEKDLSAVA VTIGPGLSLC LRVGVRKARR VAGNFSLPIV GVHHMEAHAL
201: VARLVEQELS FPFMALLISG GHNLLVLAHK LGQYTQLGTT VDDAIGEAFD KTAKWLGLDM HRSGGPAVEE LALEGDAKSV KFNVPMKYHK DCNFSYAGLK
301: TQVRLAIEAK EIDAKCPVSS ATNEDRRNRA DIAASFQRVA VLHLEEKCER AIDWALELEP SIKHMVISGG VASNKYVRLR LNNIVENKNL KLVCPPPSLC
401: TDNGVMVAWT GLEHFRVGRY DPPPPATEPE DYVYDLRPRW PLGEEYAKGR SEARSMRTAR IHPSLTSIIR ADSLQQQTQT

Arabidopsis Description

GCP1Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22145]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.