Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0485000-02 | Rice | plastid | 81.88 | 83.3 |
| TraesCS3A01G133300.1 | Wheat | plastid | 80.38 | 82.14 |
| TraesCS5B01G082600.1 | Wheat | plastid | 80.38 | 81.96 |
| TraesCS3B01G166200.1 | Wheat | plastid | 79.96 | 81.7 |
| TraesCS3D01G149500.1 | Wheat | plastid | 79.74 | 81.48 |
| TraesCS5A01G076800.1 | Wheat | plastid | 79.74 | 81.3 |
| HORVU3Hr1G029020.4 | Barley | plastid | 79.74 | 81.3 |
| TraesCS5B01G083500.1 | Wheat | plastid | 79.53 | 81.09 |
| Zm00001d040582_P002 | Maize | plastid | 36.25 | 80.57 |
| TraesCS5D01G090000.1 | Wheat | plastid | 80.17 | 78.17 |
| KRH65326 | Soybean | plastid | 64.82 | 68.31 |
| GSMUA_Achr10P... | Banana | plastid | 42.43 | 66.56 |
| Solyc05g050940.2.1 | Tomato | mitochondrion, plastid | 63.97 | 66.23 |
| CDY20454 | Canola | mitochondrion | 42.64 | 65.79 |
| VIT_15s0048g00390.t01 | Wine grape | mitochondrion | 65.03 | 65.17 |
| PGSC0003DMT400018067 | Potato | mitochondrion, plastid | 64.18 | 64.18 |
| CDY18936 | Canola | mitochondrion, plastid | 64.61 | 63.39 |
| CDX74720 | Canola | mitochondrion, plastid | 64.39 | 63.05 |
| Bra004895.1-P | Field mustard | mitochondrion | 63.75 | 62.42 |
| AT2G45270.1 | Thale cress | plastid | 63.75 | 62.29 |
| Os01t0295900-01 | Rice | mitochondrion | 24.73 | 58.88 |
| KRH76215 | Soybean | cytosol | 32.41 | 46.91 |
| KRH65783 | Soybean | nucleus | 13.43 | 33.16 |
| OQU77586 | Sorghum | plastid | 18.76 | 23.1 |
Protein Annotations
| MapMan:16.6.2.3 | Gene3D:3.30.420.40 | EntrezGene:8078160 | UniProt:A0A1W0VXB0 | GO:GO:0000003 | GO:GO:0002949 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004222 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006139 | GO:GO:0006508 |
| GO:GO:0007275 | GO:GO:0008033 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009793 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | GO:GO:0061711 | InterPro:Gcp-like_dom | InterPro:KAE1/TsaD |
| HAMAP:MF_01445 | EnsemblPlants:OQU86762 | ProteinID:OQU86762 | ProteinID:OQU86762.1 | PFAM:PF00814 | PRINTS:PR00789 |
| PANTHER:PTHR11735 | PANTHER:PTHR11735:SF6 | MetaCyc:PWY-5353 | MetaCyc:PWY-5368 | MetaCyc:PWY-5995 | MetaCyc:PWY-6433 |
| MetaCyc:PWY-6803 | MetaCyc:PWY-6958 | MetaCyc:PWY-7053 | MetaCyc:PWY-7409 | MetaCyc:PWY-7416 | MetaCyc:PWY-7470 |
| MetaCyc:PWY-7618 | EnsemblPlantsGene:SORBI_3003G141100 | SUPFAM:SSF53067 | TIGRFAMs:TIGR00329 | TIGRFAMs:TIGR03723 | InterPro:TsaD |
| UniParc:UPI0001A84FFD | RefSeq:XP_002457713.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:13754897..13766186
Molecular Weight (calculated)
50615.1 Da
IEP (calculated)
8.081
GRAVY (calculated)
-0.082
Length
469 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATLLPTLS PPVSRAAAAF LLRRAPLKPS RYLHPPPTLR RLLSSSSCPA TPPLGLRPVS TMPSTAAARA VPARRDLLML GIETSCDDTA AAVVRGDGEI
101: LSQVVSSQAD LLARYGGVAP KMAEEAHALV IDQVVQKALD DAELSESDLS AVAVTIGPGL SLCLRVGVHK ARQVAKAFGL PIVGVHHMEA HALVSRLVNK
201: DLEFPFLALL ISGGHNLLVL ARGLGQYIQL GTSIDDAIGE AYDKSARWLG LDMRKGGGPA LEELALEGDP NAVKFKVPMR QHKDCNFSYA GLKTQVRLAI
301: ESKNLCTEDV PISSASEEDR QLRANIAASF QRVAVLHLEE RCQRAVEWAL KMEPSIKYFV VSGGVASNKY VRTRLNQVAE NNGLQLVSPP PSLCTDNGVM
401: IAWTGIEHFA VGRFEDPPAA NEPDDKQYEL RPRWPLGEEY SEGRSVARSL KTARVHPSLT SMIQGSLQK
101: LSQVVSSQAD LLARYGGVAP KMAEEAHALV IDQVVQKALD DAELSESDLS AVAVTIGPGL SLCLRVGVHK ARQVAKAFGL PIVGVHHMEA HALVSRLVNK
201: DLEFPFLALL ISGGHNLLVL ARGLGQYIQL GTSIDDAIGE AYDKSARWLG LDMRKGGGPA LEELALEGDP NAVKFKVPMR QHKDCNFSYA GLKTQVRLAI
301: ESKNLCTEDV PISSASEEDR QLRANIAASF QRVAVLHLEE RCQRAVEWAL KMEPSIKYFV VSGGVASNKY VRTRLNQVAE NNGLQLVSPP PSLCTDNGVM
401: IAWTGIEHFA VGRFEDPPAA NEPDDKQYEL RPRWPLGEEY SEGRSVARSL KTARVHPSLT SMIQGSLQK
001: MVRLFLTLSP AISRFNLYPG ISILARNNNS LRLQKHHKLK TKTPTFSLIS PSSSPNFQRT RFYSTETRIS SLPYSENPNF DDNLVVLGIE TSCDDTAAAV
101: VRGNGEILSQ VISSQAELLV QYGGVAPKQA EEAHSRVIDK VVQDALDKAN LTEKDLSAVA VTIGPGLSLC LRVGVRKARR VAGNFSLPIV GVHHMEAHAL
201: VARLVEQELS FPFMALLISG GHNLLVLAHK LGQYTQLGTT VDDAIGEAFD KTAKWLGLDM HRSGGPAVEE LALEGDAKSV KFNVPMKYHK DCNFSYAGLK
301: TQVRLAIEAK EIDAKCPVSS ATNEDRRNRA DIAASFQRVA VLHLEEKCER AIDWALELEP SIKHMVISGG VASNKYVRLR LNNIVENKNL KLVCPPPSLC
401: TDNGVMVAWT GLEHFRVGRY DPPPPATEPE DYVYDLRPRW PLGEEYAKGR SEARSMRTAR IHPSLTSIIR ADSLQQQTQT
101: VRGNGEILSQ VISSQAELLV QYGGVAPKQA EEAHSRVIDK VVQDALDKAN LTEKDLSAVA VTIGPGLSLC LRVGVRKARR VAGNFSLPIV GVHHMEAHAL
201: VARLVEQELS FPFMALLISG GHNLLVLAHK LGQYTQLGTT VDDAIGEAFD KTAKWLGLDM HRSGGPAVEE LALEGDAKSV KFNVPMKYHK DCNFSYAGLK
301: TQVRLAIEAK EIDAKCPVSS ATNEDRRNRA DIAASFQRVA VLHLEEKCER AIDWALELEP SIKHMVISGG VASNKYVRLR LNNIVENKNL KLVCPPPSLC
401: TDNGVMVAWT GLEHFRVGRY DPPPPATEPE DYVYDLRPRW PLGEEYAKGR SEARSMRTAR IHPSLTSIIR ADSLQQQTQT
Arabidopsis Description
GCP1Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22145]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.