Factsheet for Zm00001d040582_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plastid	55.45	39.13
OQU86762	Sorghum	plastid	80.57	36.25
KRH65783	Soybean	nucleus	27.96	31.05
CDY20454	Canola	mitochondrion	36.02	25.0
Solyc05g050940.2.1	Tomato	mitochondrion, plastid	53.08	24.72
PGSC0003DMT400018067	Potato	mitochondrion, plastid	54.5	24.52
CDY18936	Canola	mitochondrion, plastid	54.5	24.06
CDX74720	Canola	mitochondrion, plastid	54.5	24.01
Bra004895.1-P	Field mustard	mitochondrion	53.08	23.38
KRH65326	Soybean	plastid	49.29	23.37
AT2G45270.1	Thale cress	plastid	52.13	22.92
VIT_15s0048g00390.t01	Wine grape	mitochondrion	47.87	21.58
Zm00001d037675_P001	Maize	extracellular	18.48	10.24
Zm00001d040583_P001	Maize	cytosol, plastid	9.95	6.0
KRH76215	Soybean	cytosol	4.27	2.78

Protein Annotations

Gene3D:3.30.420.40	MapMan:35.1	UniProt:A0A1D6MRI9	GO:GO:0002949	GO:GO:0003674	GO:GO:0003824
GO:GO:0004222	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006508	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	GO:GO:0016787	GO:GO:0019538
GO:GO:0046872	GO:GO:0061711	InterPro:Gcp-like_dom	InterPro:KAE1/TsaD	ProteinID:ONM31595.1	PFAM:PF00814
PRINTS:PR00789	PANTHER:PTHR11735	PANTHER:PTHR11735:SF6	SUPFAM:SSF53067	InterPro:TsaD	UniParc:UPI000221D8D2
EnsemblPlantsGene:Zm00001d040582	EnsemblPlants:Zm00001d040582_P002	EnsemblPlants:Zm00001d040582_T002	SEG:seg	:	:

Description

Probable tRNA N6-adenosine threonylcarbamoyltransferase mitochondrial

Coordinates

chr3:+:51542116..51543817

Molecular Weight (calculated)

22393.6 Da

IEP (calculated)

9.008

GRAVY (calculated)

0.329

Length

211 amino acids

Sequence
(BLAST)

001: MAATLLPTLS PPVSRAAAAF LLRRAPLKPS HYVHPPSTLR RLLISSYPAI PAMCPLSTMS STTAARAVPV RRDLLMLGIE TSCDDTAAAV VRGDGEILSQ
101: VVSSQADLLA RYGGVAPKMA EEAHALVIDQ VVQKALDDAK LSESDLSAVA VTIGPGLSLC LRVGVHKARQ VAKAFGLPIV GVHHMEAHAL VSRYLTHMAL
201: CCSINRDLKL Y

Best Arabidopsis Sequence Match ( AT2G45270.1 )
(BLAST)

001: MVRLFLTLSP AISRFNLYPG ISILARNNNS LRLQKHHKLK TKTPTFSLIS PSSSPNFQRT RFYSTETRIS SLPYSENPNF DDNLVVLGIE TSCDDTAAAV
101: VRGNGEILSQ VISSQAELLV QYGGVAPKQA EEAHSRVIDK VVQDALDKAN LTEKDLSAVA VTIGPGLSLC LRVGVRKARR VAGNFSLPIV GVHHMEAHAL
201: VARLVEQELS FPFMALLISG GHNLLVLAHK LGQYTQLGTT VDDAIGEAFD KTAKWLGLDM HRSGGPAVEE LALEGDAKSV KFNVPMKYHK DCNFSYAGLK
301: TQVRLAIEAK EIDAKCPVSS ATNEDRRNRA DIAASFQRVA VLHLEEKCER AIDWALELEP SIKHMVISGG VASNKYVRLR LNNIVENKNL KLVCPPPSLC
401: TDNGVMVAWT GLEHFRVGRY DPPPPATEPE DYVYDLRPRW PLGEEYAKGR SEARSMRTAR IHPSLTSIIR ADSLQQQTQT

Arabidopsis Description

GCP1Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22145]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.