Factsheet for Zm00001d040583_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G133300.1	Wheat	plastid	66.29	50.54
TraesCS3D01G149500.1	Wheat	plastid	66.0	50.33
TraesCS3B01G166200.1	Wheat	plastid	66.0	50.33
Os12t0485000-02	Rice	plastid	66.29	50.33
TraesCS5B01G083500.1	Wheat	plastid	66.0	50.22
TraesCS5A01G076800.1	Wheat	plastid	66.0	50.22
TraesCS5B01G082600.1	Wheat	plastid	66.0	50.22
HORVU3Hr1G029020.4	Barley	plastid	65.71	50.0
TraesCS5D01G090000.1	Wheat	plastid	65.71	47.82
KRH65326	Soybean	plastid	58.0	45.62
VIT_15s0048g00390.t01	Wine grape	mitochondrion	58.57	43.8
CDY20454	Canola	mitochondrion	37.71	43.42
Solyc05g050940.2.1	Tomato	mitochondrion, plastid	55.71	43.05
PGSC0003DMT400018067	Potato	mitochondrion, plastid	56.0	41.79
AT2G45270.1	Thale cress	plastid	56.57	41.25
CDY18936	Canola	mitochondrion, plastid	56.0	41.0
CDX74720	Canola	mitochondrion, plastid	56.0	40.92
Bra004895.1-P	Field mustard	mitochondrion	55.71	40.71
KRH76215	Soybean	cytosol	37.14	40.12
GSMUA_Achr10P...	Banana	plastid	26.86	31.44
Zm00001d037675_P001	Maize	extracellular	17.43	16.01
Zm00001d040582_P002	Maize	plastid	6.0	9.95
Os01t0295900-01	Rice	mitochondrion	5.14	9.14
KRH65783	Soybean	nucleus	3.43	6.32

Protein Annotations

MapMan:16.6.2.3	Gene3D:3.30.420.40	UniProt:A0A1D6MRJ0	GO:GO:0002949	GO:GO:0003674	GO:GO:0003824
GO:GO:0004222	GO:GO:0006139	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:Gcp-like_dom	InterPro:KAE1/TsaD	ProteinID:ONM31598.1	PFAM:PF00814
PRINTS:PR00789	PANTHER:PTHR11735	PANTHER:PTHR11735:SF6	SUPFAM:SSF53067	InterPro:TsaD	UniParc:UPI0008431710
EnsemblPlantsGene:Zm00001d040583	EnsemblPlants:Zm00001d040583_P001	EnsemblPlants:Zm00001d040583_T001	SEG:seg	:	:

Description

O-sialoglycoprotein endopeptidase

Coordinates

chr3:+:51559677..51568254

Molecular Weight (calculated)

37557.7 Da

IEP (calculated)

6.603

GRAVY (calculated)

-0.224

Length

350 amino acids

Sequence
(BLAST)

001: MIAVADAIIT TRVGATFVKG AAQAARDLEG NASEASTLAV PGGSSTDAAS KAEGTPPLPL PGCTTLLFLD NAFLAPGTRV EKRGALQNHK IVTGGHNLLV
101: LAHGLGHYIQ LGTTIDDAIG EAYDKSARWL GLDMRKGGGP ALEELALEGD PNAVKFRVPM RQHKDCNFSY AGLKTQVRLA IESKNLCTED IPVSAASEED
201: RQSRANIAAS FQRVAVLHLE ERCERAVEWA LNMEPSIKYF VVSGGVASNK YVTTRLNHVA GNNGLQLVSP PPSLCTDNGV MIAWTGIEHF VAGRFEDPPA
301: ADESDDMQYE LRPRWPLGEE YSKGRSVARS LKTARVHPSL TSMIQGSLQK

Best Arabidopsis Sequence Match ( AT2G45270.1 )
(BLAST)

001: MVRLFLTLSP AISRFNLYPG ISILARNNNS LRLQKHHKLK TKTPTFSLIS PSSSPNFQRT RFYSTETRIS SLPYSENPNF DDNLVVLGIE TSCDDTAAAV
101: VRGNGEILSQ VISSQAELLV QYGGVAPKQA EEAHSRVIDK VVQDALDKAN LTEKDLSAVA VTIGPGLSLC LRVGVRKARR VAGNFSLPIV GVHHMEAHAL
201: VARLVEQELS FPFMALLISG GHNLLVLAHK LGQYTQLGTT VDDAIGEAFD KTAKWLGLDM HRSGGPAVEE LALEGDAKSV KFNVPMKYHK DCNFSYAGLK
301: TQVRLAIEAK EIDAKCPVSS ATNEDRRNRA DIAASFQRVA VLHLEEKCER AIDWALELEP SIKHMVISGG VASNKYVRLR LNNIVENKNL KLVCPPPSLC
401: TDNGVMVAWT GLEHFRVGRY DPPPPATEPE DYVYDLRPRW PLGEEYAKGR SEARSMRTAR IHPSLTSIIR ADSLQQQTQT

Arabidopsis Description

GCP1Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22145]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.