Factsheet for Os01t0295900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 5
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plastid	50.25	33.11
Os12t0485000-02	Rice	plastid	67.51	28.85
KRH65783	Soybean	nucleus	25.89	26.84
TraesCS3A01G133300.1	Wheat	plastid	61.93	26.58
TraesCS3D01G149500.1	Wheat	plastid	60.91	26.14
TraesCS3B01G166200.1	Wheat	plastid	60.91	26.14
HORVU3Hr1G029020.4	Barley	plastid	60.41	25.87
TraesCS5B01G082600.1	Wheat	plastid	59.9	25.65
TraesCS5B01G083500.1	Wheat	plastid	59.39	25.43
TraesCS5A01G076800.1	Wheat	plastid	59.39	25.43
OQU86762	Sorghum	plastid	58.88	24.73
TraesCS5D01G090000.1	Wheat	plastid	58.88	24.12
CDY20454	Canola	mitochondrion	35.03	22.7
KRH65326	Soybean	plastid	50.25	22.25
VIT_15s0048g00390.t01	Wine grape	mitochondrion	52.28	22.01
Solyc05g050940.2.1	Tomato	mitochondrion, plastid	49.75	21.63
AT2G45270.1	Thale cress	plastid	51.27	21.04
PGSC0003DMT400018067	Potato	mitochondrion, plastid	49.75	20.9
CDX74720	Canola	mitochondrion, plastid	50.76	20.88
CDY18936	Canola	mitochondrion, plastid	49.75	20.5
Bra004895.1-P	Field mustard	mitochondrion	49.75	20.46
Zm00001d040583_P001	Maize	cytosol, plastid	9.14	5.14
KRH76215	Soybean	cytosol	5.08	3.09

Protein Annotations

Gene3D:3.30.420.40	MapMan:35.1	UniProt:A0A0P0V193	ProteinID:BAS71683.1	GO:GO:0000166	GO:GO:0002949
GO:GO:0003674	GO:GO:0003824	GO:GO:0004222	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006139	GO:GO:0006464	GO:GO:0006468	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0016787	GO:GO:0019538	InterPro:Gcp-like_dom	InterPro:KAE1/TsaD	EnsemblPlantsGene:Os01g0295900	EnsemblPlants:Os01t0295900-01
PFAM:PF00814	PRINTS:PR00789	PANTHER:PTHR11735	PANTHER:PTHR11735:SF6	SUPFAM:SSF53067	SignalP:SignalP-noTM
InterPro:TsaD	UniParc:UPI000393BC0B	SEG:seg	:	:	:

Description

Similar to cDNA clone:J023064I01, full insert sequence. (Os01t0295900-01)

Coordinates

chr1:-:10814139..10818530

Molecular Weight (calculated)

20960.5 Da

IEP (calculated)

8.694

GRAVY (calculated)

0.125

Length

197 amino acids

Sequence
(BLAST)

001: RECKAEPRWN GGHSFPHLIA AGLLLRRLLA PAPSPPVRSP TFRSLSTMPS AAGSRATPDH GNLLMLGIET SCDDTAAAVV RGDGEILSQV VSSQEDLLVR
101: WGGVAPKMAE EAHLLAIDRV VQKALDNANV SESDLSAVAV TVGPGLSLCL RVGVHKARKI AKSFHLPIVG VHHMEAQALV SRFRCDNTKI AISLMLV

Best Arabidopsis Sequence Match ( AT2G45270.1 )
(BLAST)

001: MVRLFLTLSP AISRFNLYPG ISILARNNNS LRLQKHHKLK TKTPTFSLIS PSSSPNFQRT RFYSTETRIS SLPYSENPNF DDNLVVLGIE TSCDDTAAAV
101: VRGNGEILSQ VISSQAELLV QYGGVAPKQA EEAHSRVIDK VVQDALDKAN LTEKDLSAVA VTIGPGLSLC LRVGVRKARR VAGNFSLPIV GVHHMEAHAL
201: VARLVEQELS FPFMALLISG GHNLLVLAHK LGQYTQLGTT VDDAIGEAFD KTAKWLGLDM HRSGGPAVEE LALEGDAKSV KFNVPMKYHK DCNFSYAGLK
301: TQVRLAIEAK EIDAKCPVSS ATNEDRRNRA DIAASFQRVA VLHLEEKCER AIDWALELEP SIKHMVISGG VASNKYVRLR LNNIVENKNL KLVCPPPSLC
401: TDNGVMVAWT GLEHFRVGRY DPPPPATEPE DYVYDLRPRW PLGEEYAKGR SEARSMRTAR IHPSLTSIIR ADSLQQQTQT

Arabidopsis Description

GCP1Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22145]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.