Factsheet for Bra013635.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
nucleus 2
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra006496.1-P
Bra009226.1-P
Bra010220.1-P
Bra023708.1-P
Bra029188.1-P
Bra037396.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22720.1	Bra010220.1-P	AT2G25000.1	21798944
AT4G22720.1	Bra037396.1-P	AT4G00980.1	21798944
AT4G22720.1	Bra009226.1-P	AT5G06780.1	21798944
AT4G22720.1	Bra006496.1-P	AT5G19150.1	21798944
AT4G22720.1	Bra023708.1-P	AT5G19150.1	21798944
AT4G22720.1	Bra029188.1-P	AT5G51110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79172	Canola	cytosol	96.7	96.93
AT4G22720.1	Thale cress	cytosol	76.42	91.78
KRG97103	Soybean	cytosol	71.23	85.8
KRH03601	Soybean	cytosol	70.99	85.51
PGSC0003DMT400027091	Potato	cytosol	69.34	84.97
Solyc02g068750.1.1	Tomato	cytosol	69.34	84.97
GSMUA_Achr7P10790_001	Banana	cytosol	69.1	84.44
VIT_00s2082g00010.t01	Wine grape	cytosol	28.77	80.79
OQU77586	Sorghum	plastid	65.8	73.23
TraesCS1D01G130800.1	Wheat	plastid	65.33	72.7
TraesCS1A01G123600.1	Wheat	plastid	65.33	72.7
Zm00001d037675_P001	Maize	extracellular	65.09	72.44
TraesCS1B01G143400.1	Wheat	plastid	65.09	72.44
HORVU1Hr1G028330.1	Barley	cytosol, extracellular, mitochondrion, plastid	66.27	65.2
Bra020834.1-P	Field mustard	nucleus	13.44	58.16
GSMUA_Achr10P...	Banana	cytosol	60.85	57.98
Bra004895.1-P	Field mustard	mitochondrion	20.99	18.58

Protein Annotations

MapMan:16.6.2.2.1	Gene3D:3.30.420.40	EnsemblPlantsGene:Bra013635	EnsemblPlants:Bra013635.1	EnsemblPlants:Bra013635.1-P	ncoils:Coil
GO:GO:0000408	GO:GO:0002949	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139
GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	GO:GO:0046872	GO:GO:0061711	InterPro:Gcp-like_dom	InterPro:KAE1/TsaD	InterPro:Kae1/OSGEP
UniProt:M4DAX5	HAMAP:MF_01446	PFAM:PF00814	PRINTS:PR00789	PANTHER:PTHR11735	PANTHER:PTHR11735:SF14
SUPFAM:SSF53067	TIGRFAMs:TIGR00329	UniParc:UPI000254574A	:	:	:

Description

AT4G22720 (E=2e-195) | glycoprotease M22 family protein

Coordinates

chrA01:+:6770007..6772237

Molecular Weight (calculated)

47162.1 Da

IEP (calculated)

6.969

GRAVY (calculated)

-0.158

Length

424 amino acids

Sequence
(BLAST)

001: MNNIETVIQI LRDNVKQLFR EKRPVWIHRI HPASGPIPHK LIPRGPLKIW TWILVANPAP QQVQTGRACR QMKRKIAIGF EGSANKIGVG IVTSDGTILA
101: NPRHTYITPP GHGFLPRETA HHHLDHVLPL VKSALETSQL TPEDIDCICY TKGPGMGAPL QVSAIVVRVL SQLWKKPIVG VNHCVAHIEM GRVVTGADDP
201: VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR VLNLSNDPSP GYNIEQLAKK GNNFIDLPYA VKGMDVSFSG ILSYIETTAE EKLKNNECTP
301: ADLCYSLQET LFAMLVEITE RAMAHCDKKD VLIVGGVGCN ERLQDMMRTM CSERDGRLFA TDDRYCIDNG AMIAYTGLLE FVNGIETPLE ETTFTQRFRT
401: DEVHAVWREK EVMVRGDKNV AATE

Best Arabidopsis Sequence Match ( AT4G22720.2 )
(BLAST)

001: MKKKMIAIGF EGSANKIGVG IVTLDGTILA NPRHTYITPP GHGFLPRETA HHHLDHVLPL VKSALETSQV TPEEIDCICY TKGPGMGAPL QVSAIVVRVL
101: SQLWKKPIVA VNHCVAHIEM GRVVTGADDP VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR VLKLSNDPSP GYNIEQLAKK GENFIDLPYA
201: VKGMDVSFSG ILSYIETTAE EKLKNNECTP ADLCYSLQET VFAMLVEITE RAMAHCDKKD VLIVGGVGCN ERLQEMMRTM CSERDGKLFA TDDRYCIDNG
301: AMIAYTGLLA FVNGIETPIE DSTFTQRFRT DEVHAVWREK EAVLLGDKKV AAN

Arabidopsis Description

Probable tRNA N6-adenosine threonylcarbamoyltransferase [Source:UniProtKB/TrEMBL;Acc:O49653]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.