Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P10790_001 | Banana | cytosol | 16.56 | 7.78 |
| GSMUA_Achr10P... | Banana | cytosol | 16.56 | 6.07 |
| GSMUA_Achr10P... | Banana | plastid | 2.45 | 1.34 |
Protein Annotations
| MapMan:16.6.2.3 | Gene3D:3.30.420.40 | GO:GO:0002949 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004222 |
| GO:GO:0006139 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr10G10670_001 | EnsemblPlants:GSMUA_Achr10P10670_001 | EnsemblPlants:GSMUA_Achr10T10670_001 | InterPro:Gcp-like_dom | UniProt:M0RH43 |
| PFAM:PF00814 | PANTHER:PTHR11735 | PANTHER:PTHR11735:SF6 | SUPFAM:SSF53067 | InterPro:TsaD | UniParc:UPI00029625BC |
| SEG:seg | : | : | : | : | : |
Description
O-sialoglycoprotein endopeptidase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G10670_001]
Coordinates
chr10:-:20313322..20316703
Molecular Weight (calculated)
18223.8 Da
IEP (calculated)
6.514
GRAVY (calculated)
-0.314
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHNPISLAN LDDRRSRADI AASFQRVAVL HLEERCQRAI EWALKIEPSI KYLVVSGGVA SNKYVRARLS HVVENSGLEL VCPPPSLCTD NGVMVAWTGI
101: EHFLLGRFDP PPPADEPEDA MFELRPRWPL GEEYSQGKSE ARSLKRARVF PSLTSMIQGS VQN
101: EHFLLGRFDP PPPADEPEDA MFELRPRWPL GEEYSQGKSE ARSLKRARVF PSLTSMIQGS VQN
001: MVRLFLTLSP AISRFNLYPG ISILARNNNS LRLQKHHKLK TKTPTFSLIS PSSSPNFQRT RFYSTETRIS SLPYSENPNF DDNLVVLGIE TSCDDTAAAV
101: VRGNGEILSQ VISSQAELLV QYGGVAPKQA EEAHSRVIDK VVQDALDKAN LTEKDLSAVA VTIGPGLSLC LRVGVRKARR VAGNFSLPIV GVHHMEAHAL
201: VARLVEQELS FPFMALLISG GHNLLVLAHK LGQYTQLGTT VDDAIGEAFD KTAKWLGLDM HRSGGPAVEE LALEGDAKSV KFNVPMKYHK DCNFSYAGLK
301: TQVRLAIEAK EIDAKCPVSS ATNEDRRNRA DIAASFQRVA VLHLEEKCER AIDWALELEP SIKHMVISGG VASNKYVRLR LNNIVENKNL KLVCPPPSLC
401: TDNGVMVAWT GLEHFRVGRY DPPPPATEPE DYVYDLRPRW PLGEEYAKGR SEARSMRTAR IHPSLTSIIR ADSLQQQTQT
101: VRGNGEILSQ VISSQAELLV QYGGVAPKQA EEAHSRVIDK VVQDALDKAN LTEKDLSAVA VTIGPGLSLC LRVGVRKARR VAGNFSLPIV GVHHMEAHAL
201: VARLVEQELS FPFMALLISG GHNLLVLAHK LGQYTQLGTT VDDAIGEAFD KTAKWLGLDM HRSGGPAVEE LALEGDAKSV KFNVPMKYHK DCNFSYAGLK
301: TQVRLAIEAK EIDAKCPVSS ATNEDRRNRA DIAASFQRVA VLHLEEKCER AIDWALELEP SIKHMVISGG VASNKYVRLR LNNIVENKNL KLVCPPPSLC
401: TDNGVMVAWT GLEHFRVGRY DPPPPATEPE DYVYDLRPRW PLGEEYAKGR SEARSMRTAR IHPSLTSIIR ADSLQQQTQT
Arabidopsis Description
GCP1Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22145]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.