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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 4
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G080700.2 Wheat plastid 96.84 95.58
TraesCS4A01G233500.1 Wheat plastid 96.84 95.58
HORVU4Hr1G014230.4 Barley mitochondrion 88.42 81.55
Os11t0276300-01 Rice mitochondrion 78.42 80.32
KXG28294 Sorghum plastid 78.95 75.57
Zm00001d049088_P002 Maize mitochondrion 72.89 67.4
GSMUA_Achr6P21250_001 Banana plastid 62.63 63.98
CDY47201 Canola cytosol 53.16 62.93
CDY02580 Canola cytosol 52.89 62.62
VIT_05s0020g02800.t01 Wine grape mitochondrion 58.16 62.43
Bra023708.1-P Field mustard cytosol 52.63 62.31
PGSC0003DMT400023297 Potato plastid 49.47 62.25
Solyc01g079860.2.1 Tomato cytosol, extracellular, plastid 52.37 61.8
KRH02108 Soybean cytosol 56.84 58.7
AT5G19150.1 Thale cress plastid 56.32 58.63
CDY59013 Canola plastid 51.58 57.14
CDX88899 Canola plastid 55.79 57.14
Bra006496.1-P Field mustard plastid 55.79 57.14
CDX70866 Canola plastid 54.47 56.25
CDY66931 Canola plastid 53.95 56.01
CDY59025 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 15.26 51.33
KRH51040 Soybean cytosol 56.32 50.95
Protein Annotations
Gene3D:3.40.1190.20MapMan:35.1InterPro:CARKDGO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005829GO:GO:0006139
GO:GO:0006734GO:GO:0006739GO:GO:0008150GO:GO:0008152GO:GO:0009507GO:GO:0009536
GO:GO:0009987GO:GO:0047453GO:GO:0052855GO:GO:0052856GO:GO:0052857InterPro:IPR000631
InterPro:IPR029056HAMAP:MF_01965PFAM:PF01256PFscan:PS51383PANTHER:PTHR12592PANTHER:PTHR12592:SF0
InterPro:Ribokinase-likeSUPFAM:SSF53613TIGRFAMs:TIGR00196EnsemblPlantsGene:TraesCS4B01G082200EnsemblPlants:TraesCS4B01G082200.1TIGR:cd01171
SEG:seg:::::
Description
No Description!
Coordinates
chr4B:+:80985943..80991418
Molecular Weight (calculated)
41167.6 Da
IEP (calculated)
8.213
GRAVY (calculated)
-0.043
Length
380 amino acids
Sequence
(BLAST)
001: MGACPHAWQH QLQHRGRMWA ASPAFRRQLF LLRSLAPTCA DGGRASSSSL RPHAMSAAAG PVYEADAEAV VRRITPPLDR ARHKGQAGKI AIIGGCREYT
101: GAPYFAAISA LKVGADLSHV FCTKDAATVI KSYSPELIVH PILEESYSVR DDERESVSSS ILTEVIKWVE RFDCIVVGPG LGRDSFLMDC VSNIMRHARQ
201: ANIPIVVDGD GLFLITNNIG LVEDNSLAIL TPNVYEYKRL VQKILNCEVN EENASEQLTA LCQKIGGVTI MKKGKADVIS DGKKVTQVST FGSPRRCGGQ
301: GDILSGSVAV FSSWARHFLL SNEQPKETSV NPMVLGCIAG SLLLRKAAAL AFEKNKRSTV TTDIIEFLGQ SLEDICPAGR
Best Arabidopsis Sequence Match ( AT5G19150.2 )
(BLAST)
001: MLVKPSIISG LVRLTSHSPS SSSSVLRRQE FLVRTLCGSP IIRAMSSTSE ADAESVLRTV TPSLDLKRHK GQAGKIAVIG GCREYTGAPY FAAISALKIG
101: ADLSHVFCTK DAAPVIKSYS PELIVHPVLE ESYSISQLSE EDKREVQDKV LGEVGKWMER FDCLVIGPGL GRDPFLLECV SIIMLLAKKS NVPFVIDGDG
201: LFLVTNSIDL VHSYPLAVLT PNVNEYKRLV QKVLNCEVDE QNAEDQLRSL AKQIGGVTIL RKGKSDLISN GETVKSVSIY GSPRRCGGQG DILSGGVAVF
301: LSWAQQLKSD PESPSENPAI LGCIAASGLL RKAASLAFTK HKRSTLTSDI IECLGESLED ICPAS
Arabidopsis Description
ATP-dependent (S)-NAD(P)H-hydrate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178UA58]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.