Factsheet for HORVU4Hr1G014230.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G014230.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19150.1	HORVU4Hr1G014230.4	AT5G19150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G082200.1	Wheat	mitochondrion	81.55	88.42
TraesCS4A01G233500.1	Wheat	plastid	81.8	87.53
TraesCS4D01G080700.2	Wheat	plastid	81.55	87.27
Os11t0276300-01	Rice	mitochondrion	74.76	83.02
KXG28294	Sorghum	plastid	72.57	75.31
Zm00001d049088_P002	Maize	mitochondrion	70.15	70.32
CDY47201	Canola	cytosol	54.37	69.78
CDY02580	Canola	cytosol	54.13	69.47
CDY59025	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.93	69.03
Bra023708.1-P	Field mustard	cytosol	53.64	68.85
PGSC0003DMT400023297	Potato	plastid	50.24	68.54
Solyc01g079860.2.1	Tomato	cytosol, extracellular, plastid	52.91	67.7
GSMUA_Achr6P21250_001	Banana	plastid	60.68	67.2
VIT_05s0020g02800.t01	Wine grape	mitochondrion	56.31	65.54
AT5G19150.1	Thale cress	plastid	55.83	63.01
Bra006496.1-P	Field mustard	plastid	55.83	61.99
CDX88899	Canola	plastid	55.83	61.99
KRH02108	Soybean	cytosol	54.85	61.41
CDX70866	Canola	plastid	54.13	60.6
CDY66931	Canola	plastid	53.64	60.38
CDY59013	Canola	plastid	48.54	58.31
KRH51040	Soybean	cytosol	54.37	53.33

Protein Annotations

Gene3D:3.40.1190.20	MapMan:35.1	UniProt:A0A287NB92	InterPro:CARKD	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005829	GO:GO:0006139	GO:GO:0006734	GO:GO:0006739
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016829
GO:GO:0046496	GO:GO:0047453	GO:GO:0052855	GO:GO:0052856	GO:GO:0052857	EnsemblPlantsGene:HORVU4Hr1G014230
EnsemblPlants:HORVU4Hr1G014230.4	InterPro:IPR000631	InterPro:IPR029056	HAMAP:MF_01965	PFAM:PF01256	PFscan:PS51383
PANTHER:PTHR12592	PANTHER:PTHR12592:SF0	InterPro:Ribokinase-like	SUPFAM:SSF53613	TIGRFAMs:TIGR00196	UniParc:UPI000B47D8C3
SEG:seg	:	:	:	:	:

Description

ATP-dependent (S)-NAD(P)H-hydrate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A287NB92]

Coordinates

chrchr4H:+:51661996..51715739

Molecular Weight (calculated)

44155.1 Da

IEP (calculated)

7.026

GRAVY (calculated)

-0.033

Length

412 amino acids

Sequence
(BLAST)

001: LFLLRSLAPT CVDGGRVSSS SLRLHAMSAA PAAAGPVYEA DAEAVVRRIT PPLDRARHKG QAGKIAIIGG CREYTGAPYF AAISALKVGA DLSHVFCTKD
101: AATVIKSYSP ELIVHPILEE SYSVRDDERE SVSSSILTEV IKWMERFDCI VVGPGLGRDS FLMDCVSNIM RHARQANIPT VVDGDGLFLI TNNIGLVEDN
201: SLAILTPNVY EYKRLVQKVL NCEVNEENAS EQLTALCEKI GGVTIMRKGK ADLISDGKKV TQVSTFGSPR RCGGQGDILS GSEENASEQL TALCEKIGGV
301: TIMRKGKADL ISDGKKVTQV STFGSPRRCG GQGDILSGSV AVFSSWAWHF LSSNEQPKEN SVNPMVLGCI AGSLLLRKAA ALAFEKNKRS TVTTDIIEFL
401: GQSLEDICPA GR

Best Arabidopsis Sequence Match ( AT5G19150.2 )
(BLAST)

001: MLVKPSIISG LVRLTSHSPS SSSSVLRRQE FLVRTLCGSP IIRAMSSTSE ADAESVLRTV TPSLDLKRHK GQAGKIAVIG GCREYTGAPY FAAISALKIG
101: ADLSHVFCTK DAAPVIKSYS PELIVHPVLE ESYSISQLSE EDKREVQDKV LGEVGKWMER FDCLVIGPGL GRDPFLLECV SIIMLLAKKS NVPFVIDGDG
201: LFLVTNSIDL VHSYPLAVLT PNVNEYKRLV QKVLNCEVDE QNAEDQLRSL AKQIGGVTIL RKGKSDLISN GETVKSVSIY GSPRRCGGQG DILSGGVAVF
301: LSWAQQLKSD PESPSENPAI LGCIAASGLL RKAASLAFTK HKRSTLTSDI IECLGESLED ICPAS

Arabidopsis Description

ATP-dependent (S)-NAD(P)H-hydrate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178UA58]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.