Factsheet for Os11t0276300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os11t0276300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19150.1	Os11t0276300-01	AT5G19150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG28294	Sorghum	plastid	86.25	80.6
TraesCS4B01G082200.1	Wheat	mitochondrion	80.32	78.42
TraesCS4A01G233500.1	Wheat	plastid	80.59	77.66
TraesCS4D01G080700.2	Wheat	plastid	80.32	77.4
HORVU4Hr1G014230.4	Barley	mitochondrion	83.02	74.76
Zm00001d049088_P002	Maize	mitochondrion	81.67	73.72
PGSC0003DMT400023297	Potato	plastid	57.14	70.2
CDY47201	Canola	cytosol	60.11	69.47
Solyc01g079860.2.1	Tomato	cytosol, extracellular, plastid	60.11	69.25
CDY02580	Canola	cytosol	59.57	68.85
GSMUA_Achr6P21250_001	Banana	plastid	68.46	68.28
Bra023708.1-P	Field mustard	cytosol	59.03	68.22
VIT_05s0020g02800.t01	Wine grape	mitochondrion	64.42	67.51
CDY59025	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.22	66.37
AT5G19150.1	Thale cress	plastid	62.8	63.84
KRH02108	Soybean	cytosol	62.8	63.32
CDX88899	Canola	plastid	62.53	62.53
Bra006496.1-P	Field mustard	plastid	62.26	62.26
CDX70866	Canola	plastid	60.38	60.87
CDY66931	Canola	plastid	59.57	60.38
CDY59013	Canola	plastid	54.45	58.89
KRH51040	Soybean	cytosol	63.34	55.95

Protein Annotations

Gene3D:3.40.1190.20	MapMan:35.1	ProteinID:AAX92837.1	ProteinID:ABA92626.1	ProteinID:BAF28050.1	ProteinID:BAT13591.1
InterPro:CARKD	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005829
GO:GO:0006139	GO:GO:0006734	GO:GO:0006739	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016829	GO:GO:0046496	GO:GO:0047453	GO:GO:0052855
GO:GO:0052856	GO:GO:0052857	InterPro:IPR000631	InterPro:IPR029056	HAMAP:MF_01965	EnsemblPlantsGene:Os11g0276300
EnsemblPlants:Os11t0276300-01	PFAM:PF01256	PFscan:PS51383	PANTHER:PTHR12592	PANTHER:PTHR12592:SF0	UniProt:Q53Q78
InterPro:Ribokinase-like	SUPFAM:SSF53613	SignalP:SignalP-noTM	TIGRFAMs:TIGR00196	UniParc:UPI000050893F	SEG:seg

Description

Uncharacterised protein family, carbohydrate kinase-related domain containing protein. (Os11t0276300-01)

Coordinates

chr11:-:9815907..9820202

Molecular Weight (calculated)

39915.1 Da

IEP (calculated)

8.206

GRAVY (calculated)

0.019

Length

371 amino acids

Sequence
(BLAST)

001: MWAASPAFRR RLFLLRSLSP SPCAALPGNA ACSSSPSPST SIRVNAMSAS GPVYEADAEA VVRRITPPLD RARHKGQAGK IAVIGGCREY TGAPYFAAIS
101: ALKVGADLSH VFCTRDAATV IKSYSPELIV HPILEESYSV SDGERESVSS RILTEVAKWM ERFDCIVVGP GLGRDSFLLD CVSNIMRHAR QANIPTVVDG
201: DGLFLITNNL SLVEGNLLAI LTPNVYEYKR LVQKVLNCEV NEENASEQLT ALCQKIGGIT IMRKGKADII SDGKTVTQVS TFGSPRRCGG QGDILSGSVA
301: VFASWARHFL LTNEYPTEKS VNPMMLGCIA GSLLLRKAAS HAFEKNKRST VTTDIIELLG KSLEDICPAG H

Best Arabidopsis Sequence Match ( AT5G19150.2 )
(BLAST)

001: MLVKPSIISG LVRLTSHSPS SSSSVLRRQE FLVRTLCGSP IIRAMSSTSE ADAESVLRTV TPSLDLKRHK GQAGKIAVIG GCREYTGAPY FAAISALKIG
101: ADLSHVFCTK DAAPVIKSYS PELIVHPVLE ESYSISQLSE EDKREVQDKV LGEVGKWMER FDCLVIGPGL GRDPFLLECV SIIMLLAKKS NVPFVIDGDG
201: LFLVTNSIDL VHSYPLAVLT PNVNEYKRLV QKVLNCEVDE QNAEDQLRSL AKQIGGVTIL RKGKSDLISN GETVKSVSIY GSPRRCGGQG DILSGGVAVF
301: LSWAQQLKSD PESPSENPAI LGCIAASGLL RKAASLAFTK HKRSTLTSDI IECLGESLED ICPAS

Arabidopsis Description

ATP-dependent (S)-NAD(P)H-hydrate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178UA58]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.