Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400023297 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G19150.1 | PGSC0003DMT400023297 | AT5G19150.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g079860.2.1 | Tomato | cytosol, extracellular, plastid | 93.71 | 87.89 |
| CDY59025 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 27.48 | 73.45 |
| Bra023708.1-P | Field mustard | cytosol | 72.52 | 68.22 |
| CDY02580 | Canola | cytosol | 72.19 | 67.91 |
| VIT_05s0020g02800.t01 | Wine grape | mitochondrion | 79.47 | 67.8 |
| CDY47201 | Canola | cytosol | 71.85 | 67.6 |
| KRH02108 | Soybean | cytosol | 75.83 | 62.23 |
| AT5G19150.1 | Thale cress | plastid | 73.84 | 61.1 |
| CDX88899 | Canola | plastid | 73.51 | 59.84 |
| Bra006496.1-P | Field mustard | plastid | 73.18 | 59.57 |
| CDX70866 | Canola | plastid | 71.85 | 58.97 |
| GSMUA_Achr6P21250_001 | Banana | plastid | 71.52 | 58.06 |
| Os11t0276300-01 | Rice | mitochondrion | 70.2 | 57.14 |
| CDY66931 | Canola | plastid | 68.87 | 56.83 |
| CDY59013 | Canola | plastid | 62.25 | 54.81 |
| KRH51040 | Soybean | cytosol | 76.16 | 54.76 |
| KXG28294 | Sorghum | plastid | 70.86 | 53.9 |
| Zm00001d049088_P002 | Maize | mitochondrion | 69.54 | 51.09 |
| HORVU4Hr1G014230.4 | Barley | mitochondrion | 68.54 | 50.24 |
| TraesCS4B01G082200.1 | Wheat | mitochondrion | 62.25 | 49.47 |
| TraesCS4A01G233500.1 | Wheat | plastid | 62.91 | 49.35 |
| TraesCS4D01G080700.2 | Wheat | plastid | 62.25 | 48.83 |
Protein Annotations
| Gene3D:3.40.1190.20 | MapMan:35.1 | InterPro:CARKD | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006734 | GO:GO:0006739 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0046496 |
| GO:GO:0047453 | GO:GO:0052855 | GO:GO:0052856 | GO:GO:0052857 | InterPro:IPR000631 | InterPro:IPR029056 |
| UniProt:M1AI46 | HAMAP:MF_01965 | PFAM:PF01256 | EnsemblPlantsGene:PGSC0003DMG400009024 | PGSC:PGSC0003DMG400009024 | EnsemblPlants:PGSC0003DMT400023297 |
| PFscan:PS51383 | PANTHER:PTHR12592 | PANTHER:PTHR12592:SF0 | InterPro:Ribokinase-like | SUPFAM:SSF53613 | TIGRFAMs:TIGR00196 |
| UniParc:UPI000295838E | : | : | : | : | : |
Description
Carbohydrate kinase family [Source:PGSC_GENE;Acc:PGSC0003DMG400009024]
Coordinates
chr1:-:62010497..62018230
Molecular Weight (calculated)
32428.3 Da
IEP (calculated)
6.267
GRAVY (calculated)
0.143
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLLDCYILS SVSQSGKIAV VGGCREYTGA PYFSAISALK IGADLSHVFC TKDAAPVIKS YSPELIVHPI LEESYSIRDE EKSSISAKVI TEVEKWMERF
101: DCLVVGPGLG RDPFLLDCVS NIMKHARERN VPMVIDGDGL YLVTNCLDLV SGYPLAVLTP NVNEYKRLVQ KVLNSEVNDE NGTDQLLSLA KGIGGVTILR
201: KGKSDFVSDG KTACAVSIYG SPRRCGGQGD ILSGSVAVFL SWARQCAAKG EVSMNPTILG CVAGSALLRY AASMAFDNKK RSTLTGDIIE CLGRSLQEIC
301: PV
101: DCLVVGPGLG RDPFLLDCVS NIMKHARERN VPMVIDGDGL YLVTNCLDLV SGYPLAVLTP NVNEYKRLVQ KVLNSEVNDE NGTDQLLSLA KGIGGVTILR
201: KGKSDFVSDG KTACAVSIYG SPRRCGGQGD ILSGSVAVFL SWARQCAAKG EVSMNPTILG CVAGSALLRY AASMAFDNKK RSTLTGDIIE CLGRSLQEIC
301: PV
001: MLVKPSIISG LVRLTSHSPS SSSSVLRRQE FLVRTLCGSP IIRAMSSTSE ADAESVLRTV TPSLDLKRHK GQAGKIAVIG GCREYTGAPY FAAISALKIG
101: ADLSHVFCTK DAAPVIKSYS PELIVHPVLE ESYSISQLSE EDKREVQDKV LGEVGKWMER FDCLVIGPGL GRDPFLLECV SIIMLLAKKS NVPFVIDGDG
201: LFLVTNSIDL VHSYPLAVLT PNVNEYKRLV QKVLNCEVDE QNAEDQLRSL AKQIGGVTIL RKGKSDLISN GETVKSVSIY GSPRRCGGQG DILSGGVAVF
301: LSWAQQLKSD PESPSENPAI LGCIAASGLL RKAASLAFTK HKRSTLTSDI IECLGESLED ICPAS
101: ADLSHVFCTK DAAPVIKSYS PELIVHPVLE ESYSISQLSE EDKREVQDKV LGEVGKWMER FDCLVIGPGL GRDPFLLECV SIIMLLAKKS NVPFVIDGDG
201: LFLVTNSIDL VHSYPLAVLT PNVNEYKRLV QKVLNCEVDE QNAEDQLRSL AKQIGGVTIL RKGKSDLISN GETVKSVSIY GSPRRCGGQG DILSGGVAVF
301: LSWAQQLKSD PESPSENPAI LGCIAASGLL RKAASLAFTK HKRSTLTSDI IECLGESLED ICPAS
Arabidopsis Description
ATP-dependent (S)-NAD(P)H-hydrate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178UA58]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.