CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH02108
KRH51040

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19150.1	KRH02108	AT5G19150.1	21798944
AT5G19150.1	KRH51040	AT5G19150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02108	Soybean	cytosol	80.48	91.85
VIT_05s0020g02800.t01	Wine grape	mitochondrion	65.95	78.25
Solyc01g079860.2.1	Tomato	cytosol, extracellular, plastid	58.57	76.4
PGSC0003DMT400023297	Potato	plastid	54.76	76.16
CDY59025	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.76	73.45
Bra023708.1-P	Field mustard	cytosol	55.71	72.9
CDY47201	Canola	cytosol	55.71	72.9
CDY02580	Canola	cytosol	55.24	72.27
AT5G19150.1	Thale cress	plastid	59.52	68.49
GSMUA_Achr6P21250_001	Banana	plastid	59.76	67.47
CDX88899	Canola	plastid	59.29	67.12
Bra006496.1-P	Field mustard	plastid	58.81	66.58
CDX70866	Canola	plastid	57.86	66.03
CDY66931	Canola	plastid	55.95	64.21
CDY59013	Canola	plastid	52.14	63.85
Os11t0276300-01	Rice	mitochondrion	55.95	63.34
KXG28294	Sorghum	plastid	56.43	59.7
TraesCS4B01G082200.1	Wheat	mitochondrion	50.95	56.32
TraesCS4D01G080700.2	Wheat	plastid	51.43	56.1
Zm00001d049088_P002	Maize	mitochondrion	54.76	55.96
TraesCS4A01G233500.1	Wheat	plastid	50.95	55.58
HORVU4Hr1G014230.4	Barley	mitochondrion	53.33	54.37

Protein Annotations

EntrezGene:100807779	Gene3D:3.40.1190.20	MapMan:35.1	UniProt:A0A0R0J8D7	EMBL:ACUP02004727	InterPro:CARKD
EnsemblPlantsGene:GLYMA_07G257800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016829	GO:GO:0046496
GO:GO:0047453	GO:GO:0052855	InterPro:IPR000631	InterPro:IPR029056	EnsemblPlants:KRH51040	ProteinID:KRH51040
ProteinID:KRH51040.1	HAMAP:MF_01965	PFAM:PF01256	PFscan:PS51383	PANTHER:PTHR12592	PANTHER:PTHR12592:SF0
InterPro:Ribokinase-like	SUPFAM:SSF53613	TIGRFAMs:TIGR00196	UniParc:UPI0006ED71DA	:	:

Description

hypothetical protein

Coordinates

chr7:-:43390834..43395588

Molecular Weight (calculated)

45224.7 Da

IEP (calculated)

8.417

GRAVY (calculated)

0.080

Length

420 amino acids

Sequence
(BLAST)

001: MKCKTVGLSL ESSKVGVAGN GIIKSASISK PFISLQSNYV FLKHCWDWCL LKLMRDGMNS RILLDAAKSC ILASSPVFRR QQFLIRCVGG STDQRDMQAL
101: RSLEVDSQSI IRAITPALDP TRHKGQAGNI AVIGGCREYT GAPYFSAISA LKIGADLSHV FCTTDAAPVI KSYSPELIVH PVLEESYNVG EEHKSSIASK
201: VLAEVDKWLE RFDCLVVGPG LGRDPFLLDC VSEIMRHARQ SNIPIVIDGD GLFLVTNNLE LVSGYALAVL TPNVNEYKRL VQKVLSSEVN DIDAPQQLLS
301: LAKQIGGVTI LRKGNSDLIS DGDTVKSVSV YGSPRRCGGQ GDILSGSVAV FLSWARQHIL AADSNSNIRF KNPTVLGCIA GSAILRKAAS LAFSNKKRST
401: VTGDIIECLG KSLEDISPAS

Best Arabidopsis Sequence Match ( AT5G19150.2 )
(BLAST)

001: MLVKPSIISG LVRLTSHSPS SSSSVLRRQE FLVRTLCGSP IIRAMSSTSE ADAESVLRTV TPSLDLKRHK GQAGKIAVIG GCREYTGAPY FAAISALKIG
101: ADLSHVFCTK DAAPVIKSYS PELIVHPVLE ESYSISQLSE EDKREVQDKV LGEVGKWMER FDCLVIGPGL GRDPFLLECV SIIMLLAKKS NVPFVIDGDG
201: LFLVTNSIDL VHSYPLAVLT PNVNEYKRLV QKVLNCEVDE QNAEDQLRSL AKQIGGVTIL RKGKSDLISN GETVKSVSIY GSPRRCGGQG DILSGGVAVF
301: LSWAQQLKSD PESPSENPAI LGCIAASGLL RKAASLAFTK HKRSTLTSDI IECLGESLED ICPAS

Arabidopsis Description

ATP-dependent (S)-NAD(P)H-hydrate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178UA58]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.