Factsheet for TraesCS6A01G180900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G164200.2	Wheat	nucleus	98.67	98.93
TraesCS6B01G204600.3	Wheat	cytosol	96.0	90.23
EES06400	Sorghum	nucleus	84.27	84.49
Os02t0186500-01	Rice	cytosol, plasma membrane	82.93	82.49
Zm00001d015581_P001	Maize	cytosol	79.47	79.05
HORVU6Hr1G035880.2	Barley	plastid	95.73	77.71
Zm00001d053725_P002	Maize	nucleus	73.6	73.21
GSMUA_Achr4P20290_001	Banana	cytosol	61.33	71.65
VIT_09s0002g07060.t01	Wine grape	cytosol	69.33	69.33
Solyc03g116760.2.1	Tomato	cytosol, endoplasmic reticulum	67.47	68.94
KRH23586	Soybean	cytosol	66.93	68.39
PGSC0003DMT400001716	Potato	cytosol	66.67	68.12
KRH09718	Soybean	mitochondrion	66.13	67.57
GSMUA_Achr9P22520_001	Banana	mitochondrion	62.13	67.15
KRH44474	Soybean	mitochondrion	64.27	66.39
KRH47436	Soybean	cytosol, mitochondrion, plastid	61.87	64.09
AT1G52540.1	Thale cress	cytosol	56.53	60.57
AT3G15890.1	Thale cress	cytosol	56.27	58.45
CDY21883	Canola	cytosol	52.0	57.52
Bra030378.1-P	Field mustard	cytosol	52.27	57.48
CDY49913	Canola	cytosol	53.33	56.98
CDY20162	Canola	cytosol	49.87	56.16
CDY40153	Canola	cytosol	49.07	56.1
Bra021143.1-P	Field mustard	cytosol	50.93	56.01
Bra018971.1-P	Field mustard	cytosol	49.07	54.44
CDX87914	Canola	cytosol	53.6	54.32
CDX75852	Canola	cytosol	49.87	54.2
CDY66888	Canola	cytosol	48.8	54.14
Bra001614.1-P	Field mustard	cytosol	49.33	53.62
CDX82425	Canola	cytosol	49.07	53.33
TraesCS7A01G129300.1	Wheat	mitochondrion	50.67	51.91
KRH04634	Soybean	mitochondrion	15.2	51.35
KRH47437	Soybean	mitochondrion	46.4	49.71
TraesCS5A01G319400.1	Wheat	cytosol	48.8	47.41
TraesCS7A01G497600.1	Wheat	cytosol	49.33	42.05
TraesCS3A01G078700.1	Wheat	plasma membrane	29.6	20.04

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.44	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF88	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6A01G180900	EnsemblPlants:TraesCS6A01G180900.1	TIGR:cd14066
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:205105629..205109195

Molecular Weight (calculated)

41804.8 Da

IEP (calculated)

7.342

GRAVY (calculated)

-0.446

Length

375 amino acids

Sequence
(BLAST)

001: MGWLSCCKRS NGAQPGRKKK KKDTTWRIFS LKELQLATNN FNYDNKLGEG GFGSVYWGQL WDGSQIAVKR LKSWSNKAEK EFAVEVEVLA RVRHKSLLSL
101: RGYCAEGQER LIVYDYMQNL SLHSHLHGQH AAECHLGWER RMNIAIDSAE GIAYLHHHAI PHIIHRDVKA SNVLLDANFQ ARVADFGFAK LIPDGATHVT
201: TKVKGTLGYL APEYAMLGKA KESCDVYSFG VLLLELASGK KPVEKINPTT KLTITEWALP LTREQKFKEM ADPKLGDSFA EAEVKRMVLV GLACTQTKPE
301: QRPVMSEVVE MLKGESAEKF SILENDDLFK PQQTTSSVQG TSGPCSSDAI TEEKESKEDT IEEATDSSET VPSAR

Best Arabidopsis Sequence Match ( AT3G15890.1 )
(BLAST)

001: MQLLNSCCGK GFDGKKKEKE EPSWRVFSLK ELHAATNSFN YDNKLGEGRF GSVYWGQLWD GSQIAVKRLK EWSNREEIDF AVEVEILARI RHKNLLSVRG
101: YCAEGQERLL VYEYMQNLSL VSHLHGQHSA ECLLDWTKRM KIAISSAQAI AYLHDHATPH IVHGDVRASN VLLDSEFEAR VTDFGYGKLM PDDDTGDGAT
201: KAKSNNGYIS PECDASGKES ETSDVYSFGI LLMVLVSGKR PLERLNPTTT RCITEWVLPL VYERNFGEIV DKRLSEEHVA EKLKKVVLVG LMCAQTDPDK
301: RPTMSEVVEM LVNESKEKIS ELEANPLFKN PYSSNENNRE HVAEESSDVI LEDKDHQQQQ E

Arabidopsis Description

PTI1-like tyrosine-protein kinase At3g15890 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.