Factsheet for PGSC0003DMT400001716

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g116760.2.1	Tomato	cytosol, endoplasmic reticulum	92.64	92.64
GSMUA_Achr4P20290_001	Banana	cytosol	67.3	76.95
KRH23586	Soybean	cytosol	76.57	76.57
KRH09718	Soybean	mitochondrion	76.29	76.29
VIT_09s0002g07060.t01	Wine grape	cytosol	74.93	73.33
KRH44474	Soybean	mitochondrion	72.21	73.0
KRH47436	Soybean	cytosol, mitochondrion, plastid	71.66	72.65
GSMUA_Achr6P35110_001	Banana	cytosol	71.39	71.78
GSMUA_Achr9P22520_001	Banana	mitochondrion	67.03	70.89
GSMUA_Achr8P18500_001	Banana	mitochondrion	65.67	68.08
EES06400	Sorghum	nucleus	68.66	67.38
Os02t0186500-01	Rice	cytosol, plasma membrane	69.21	67.37
TraesCS6D01G164200.2	Wheat	nucleus	68.39	67.11
TraesCS6A01G180900.1	Wheat	nucleus	68.12	66.67
Zm00001d015581_P001	Maize	cytosol	67.57	65.78
Zm00001d053725_P002	Maize	nucleus	67.03	65.25
AT1G52540.1	Thale cress	cytosol	60.49	63.43
TraesCS6B01G204600.3	Wheat	cytosol	67.3	61.9
CDY49913	Canola	cytosol	58.58	61.25
Bra030378.1-P	Field mustard	cytosol	56.13	60.41
CDY40153	Canola	cytosol	53.41	59.76
KRH04634	Soybean	mitochondrion	17.98	59.46
AT3G15890.1	Thale cress	cytosol	57.77	58.73
CDX87914	Canola	cytosol	59.13	58.65
CDY66888	Canola	cytosol	53.68	58.28
Bra018971.1-P	Field mustard	cytosol	53.68	58.28
KRH47437	Soybean	mitochondrion	55.04	57.71
CDY20162	Canola	cytosol	52.32	57.66
Zm00001d036300_P001	Maize	mitochondrion, nucleus, plastid	54.22	57.35
Bra021143.1-P	Field mustard	cytosol	53.13	57.18
CDY21883	Canola	cytosol	52.32	56.64
CDX82425	Canola	cytosol	51.77	55.07
PGSC0003DMT400092156	Potato	cytosol	49.32	55.02
EER87920	Sorghum	mitochondrion	54.77	54.77
CDX75852	Canola	cytosol	51.23	54.49
Bra001614.1-P	Field mustard	cytosol	50.68	53.91
HORVU6Hr1G035880.2	Barley	plastid	67.85	53.9
TraesCS7B01G029200.1	Wheat	mitochondrion	53.13	53.13
TraesCS7A01G129300.1	Wheat	mitochondrion	52.86	53.01
TraesCS7D01G128300.1	Wheat	mitochondrion	52.86	53.01
PGSC0003DMT400070632	Potato	cytosol	56.4	52.94
Os06t0166900-01	Rice	plasma membrane	52.32	52.32
Zm00001d045202_P002	Maize	mitochondrion	52.86	51.73
HORVU7Hr1G027010.1	Barley	plastid	53.13	42.67
PGSC0003DMT400024351	Potato	plasma membrane	30.25	20.26

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102602803	MapMan:18.4.1.44	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0ZIZ1	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400000642
PGSC:PGSC0003DMG400000642	EnsemblPlants:PGSC0003DMT400001716	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF88	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294C234	RefSeq:XP_006364223.1	SEG:seg	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400000642]

Coordinates

chr3:-:56535358..56540706

Molecular Weight (calculated)

40950.1 Da

IEP (calculated)

6.443

GRAVY (calculated)

-0.266

Length

367 amino acids

Sequence
(BLAST)

001: MAFSSIFCCV KGSDRKGKAK KQPSWRVFSL KELHSATNNF NYDNKLGEGG FGSVYWGQLW DGSQIAVKRL KVWSNKAEME FAVEVEILAR VRHKNLLSLR
101: GYCAEGQERL IVYDYMPNLS LLSHLHGQHS AESLLDWKRR MNVAIGSAEG IAYLHHHATP HIIHRDIKAS NVLLDSDFQA QVADFGFAKF IPDGATHVTT
201: RVKGTLGYLA PEYAMLGKAS ESCDVYSFGI LLLELASGKK PIEKVDLTVK RTITDWALPL VCEGKLSELA DPRLSGNYVE EELKRLVLVA LVCAQNRPEK
301: RPTMLDVIEL LKGEAKEKFT ALENDEMFKI PPVVDDDVLS GTEGNADSTA SEEKEPKPEI EKIEVQA

Best Arabidopsis Sequence Match ( AT1G52540.1 )
(BLAST)

001: MQIFSCFCCG KGFDRQKKVK TEPSWRIFSL KELHAATNSF NYDNKLGEGR FGSVYWGQLW DGSQIAVKRL KAWSSREEID FAVEVEILAR IRHKNLLSVR
101: GYCAEGQERL IVYDYMPNLS LVSHLHGQHS SESLLDWTRR MNIAVSSAQA IAYLHHFATP RIVHGDVRAS NVLLDSEFEA RVTDFGYDKL MPDDGANKST
201: KGNNIGYLSP ECIESGKESD MGDVYSFGVL LLELVTGKRP TERVNLTTKR GITEWVLPLV YERKFGEIVD QRLNGKYVEE ELKRIVLVGL MCAQRESEKR
301: PTMSEVVEML MIESKEKMAQ LEANPLFNGN NDGEVIDESS EIISEVRDHQ

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LDB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.