CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82425	Canola	cytosol	87.54	87.54
CDY21883	Canola	cytosol	72.75	74.04
CDY20162	Canola	cytosol	69.57	72.07
AT3G15890.1	Thale cress	cytosol	73.33	70.08
CDY40153	Canola	cytosol	66.09	69.51
CDY66888	Canola	cytosol	65.51	66.86
CDY49913	Canola	cytosol	65.8	64.67
CDX87914	Canola	cytosol	67.54	62.97
GSMUA_Achr4P20290_001	Banana	cytosol	49.86	53.58
GSMUA_Achr8P18500_001	Banana	mitochondrion	54.78	53.39
VIT_09s0002g07060.t01	Wine grape	cytosol	57.1	52.53
PGSC0003DMT400001716	Potato	cytosol	54.49	51.23
Solyc03g116760.2.1	Tomato	cytosol, endoplasmic reticulum	54.49	51.23
Os02t0186500-01	Rice	cytosol, plasma membrane	55.36	50.66
GSMUA_Achr6P35110_001	Banana	cytosol	53.04	50.14
EES06400	Sorghum	nucleus	54.2	50.0
TraesCS6D01G164200.2	Wheat	nucleus	54.2	50.0
TraesCS6A01G180900.1	Wheat	nucleus	54.2	49.87
GSMUA_Achr9P22520_001	Banana	mitochondrion	48.41	48.13
Zm00001d053725_P002	Maize	nucleus	52.46	48.01
Zm00001d015581_P001	Maize	cytosol	51.88	47.48
Zm00001d036300_P001	Maize	mitochondrion, nucleus, plastid	47.54	47.26
TraesCS6B01G204600.3	Wheat	cytosol	54.49	47.12
Os06t0166900-01	Rice	plasma membrane	48.99	46.05
KRH04634	Soybean	mitochondrion	14.78	45.95
TraesCS7B01G029200.1	Wheat	mitochondrion	48.41	45.5
EER87920	Sorghum	mitochondrion	48.12	45.23
TraesCS7A01G129300.1	Wheat	mitochondrion	47.83	45.08
TraesCS7D01G128300.1	Wheat	mitochondrion	47.83	45.08
Zm00001d045202_P002	Maize	mitochondrion	47.83	44.0
HORVU6Hr1G035880.2	Barley	plastid	53.62	40.04
HORVU7Hr1G027010.1	Barley	plastid	48.12	36.32
CDY02544	Canola	plasma membrane	30.43	19.23
CDY47532	Canola	plasma membrane	30.14	18.94

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.44	Gene3D:3.30.200.20	GO:A0A078CGD7	EnsemblPlants:CDX75852	ProteinID:CDX75852
ProteinID:CDX75852.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00123825001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00109	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF88	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_AS
UniParc:UPI0004EE794D	SEG:seg	:	:	:	:

Description

BnaC03g39350D

Coordinates

chrLK031805:+:1176544..1178449

Molecular Weight (calculated)

38879.1 Da

IEP (calculated)

5.784

GRAVY (calculated)

-0.499

Length

345 amino acids

Sequence
(BLAST)

001: MQLFSSCCGR GSAGDKEAKT EPPRKIFSLK ELHAATNSFN YDNKLGEGRF SSVYWGQLSD GSQIAVKRLK SWTNREDINF TLVVEILSRI RHKNLLSVRG
101: YCNEGQERLL VYEYMPNLSL VSHLHGQHSA ECILDCNKRI KIAITSAQAI AYLHHHATPR VVHGDVRASN VLLDSEFEAR VTDFGYGKLM PEDEAKSNNN
201: NNGYLSPECV ASEAGDVYSF GILLLELVSG KRAKLGLTEW VLPLVYERKF GEIVDQRVKE EDVGEGLKKV VLVGLLCAQR EAEMRPTMSQ VVEMLMNESK
301: EKMSELECNP LFKKPCSSGD ENHREDQEGA DVITEEKDDH HQQQE

Best Arabidopsis Sequence Match ( AT3G15890.1 )
(BLAST)

001: MQLLNSCCGK GFDGKKKEKE EPSWRVFSLK ELHAATNSFN YDNKLGEGRF GSVYWGQLWD GSQIAVKRLK EWSNREEIDF AVEVEILARI RHKNLLSVRG
101: YCAEGQERLL VYEYMQNLSL VSHLHGQHSA ECLLDWTKRM KIAISSAQAI AYLHDHATPH IVHGDVRASN VLLDSEFEAR VTDFGYGKLM PDDDTGDGAT
201: KAKSNNGYIS PECDASGKES ETSDVYSFGI LLMVLVSGKR PLERLNPTTT RCITEWVLPL VYERNFGEIV DKRLSEEHVA EKLKKVVLVG LMCAQTDPDK
301: RPTMSEVVEM LVNESKEKIS ELEANPLFKN PYSSNENNRE HVAEESSDVI LEDKDHQQQQ E

Arabidopsis Description

PTI1-like tyrosine-protein kinase At3g15890 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.