CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015581_P001	Maize	cytosol	89.04	88.33
TraesCS6D01G164200.2	Wheat	nucleus	84.49	84.49
TraesCS6A01G180900.1	Wheat	nucleus	84.49	84.27
Os02t0186500-01	Rice	cytosol, plasma membrane	84.76	84.08
TraesCS6B01G204600.3	Wheat	cytosol	82.89	77.69
Zm00001d053725_P002	Maize	nucleus	78.07	77.45
GSMUA_Achr4P20290_001	Banana	cytosol	63.1	73.52
Solyc03g116760.2.1	Tomato	cytosol, endoplasmic reticulum	67.38	68.66
PGSC0003DMT400001716	Potato	cytosol	67.38	68.66
KRH44474	Soybean	mitochondrion	66.04	68.04
VIT_09s0002g07060.t01	Wine grape	cytosol	68.18	68.0
KRH23586	Soybean	cytosol	66.58	67.85
GSMUA_Achr9P22520_001	Banana	mitochondrion	62.83	67.72
KRH09718	Soybean	mitochondrion	66.31	67.57
HORVU6Hr1G035880.2	Barley	plastid	82.09	66.45
KRH47436	Soybean	cytosol, mitochondrion, plastid	63.64	65.75
AT1G52540.1	Thale cress	cytosol	55.88	59.71
CDY21883	Canola	cytosol	52.67	58.11
Bra030378.1-P	Field mustard	cytosol	52.94	58.06
AT3G15890.1	Thale cress	cytosol	55.88	57.89
CDY20162	Canola	cytosol	51.07	57.36
CDY40153	Canola	cytosol	50.0	57.01
Bra021143.1-P	Field mustard	cytosol	51.87	56.89
CDY49913	Canola	cytosol	53.21	56.7
Bra018971.1-P	Field mustard	cytosol	50.0	55.33
CDY66888	Canola	cytosol	50.0	55.33
CDX82425	Canola	cytosol	50.0	54.2
CDX75852	Canola	cytosol	50.0	54.2
Bra001614.1-P	Field mustard	cytosol	50.0	54.2
CDX87914	Canola	cytosol	52.94	53.51
EER87920	Sorghum	mitochondrion	51.6	52.59
KRH47437	Soybean	mitochondrion	48.93	52.29
KRH04634	Soybean	mitochondrion	15.51	52.25
KXG36063	Sorghum	cytosol, plastid	49.73	48.19
EER88757	Sorghum	cytosol, plastid	52.41	44.85
EES00463	Sorghum	plasma membrane	26.74	18.02

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.44	Gene3D:3.30.200.20	EntrezGene:8077644	UniProt:C5XWZ0	EnsemblPlants:EES06400
ProteinID:EES06400	ProteinID:EES06400.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF88	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3004G069200	SUPFAM:SSF56112
unigene:Sbi.19741	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A85B99	RefSeq:XP_002453424.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:5637293..5640588

Molecular Weight (calculated)

41827.6 Da

IEP (calculated)

6.993

GRAVY (calculated)

-0.493

Length

374 amino acids

Sequence
(BLAST)

001: MGWGWSSCCK RSDGAEPGRR KKKKDTTWRI FSLKELQSAT NNFNYDNKLG EGGFGSVYWG QLWDGSQIAV KRLKSWSNKA EREFAVEVEI LARVRHKSLL
101: SLRGYCAEGQ ERLIVYDYMP NLSIHSQLHG QHAAECNLSW ERRMKIAVDS AEGIAYLHHY ATPHIIHRDV KASNVLLDSN FQARVADFGF AKLIPDGATH
201: VTTKVKGTLG YLAPEYAMLG KASESCDVFS FGIMLLELAS GKKPVEKLNP TTKKTITEWA LPLVRDKKFK EIADPKLKDS FVEDELKRMV LVGIACSQDK
301: PEQRPIMSEV VELLKGESTE KLSNLENDDL FKPDSSFQSS SGPDSSDCVT EERSPKADAI EEAVDSSETV PSAR

Best Arabidopsis Sequence Match ( AT3G15890.1 )
(BLAST)

001: MQLLNSCCGK GFDGKKKEKE EPSWRVFSLK ELHAATNSFN YDNKLGEGRF GSVYWGQLWD GSQIAVKRLK EWSNREEIDF AVEVEILARI RHKNLLSVRG
101: YCAEGQERLL VYEYMQNLSL VSHLHGQHSA ECLLDWTKRM KIAISSAQAI AYLHDHATPH IVHGDVRASN VLLDSEFEAR VTDFGYGKLM PDDDTGDGAT
201: KAKSNNGYIS PECDASGKES ETSDVYSFGI LLMVLVSGKR PLERLNPTTT RCITEWVLPL VYERNFGEIV DKRLSEEHVA EKLKKVVLVG LMCAQTDPDK
301: RPTMSEVVEM LVNESKEKIS ELEANPLFKN PYSSNENNRE HVAEESSDVI LEDKDHQQQQ E

Arabidopsis Description

PTI1-like tyrosine-protein kinase At3g15890 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.