Factsheet for Bra030378.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49913	Canola	cytosol	92.67	90.03
Bra018971.1-P	Field mustard	cytosol	76.83	77.51
AT1G52540.1	Thale cress	cytosol	79.47	77.43
Bra021143.1-P	Field mustard	cytosol	67.45	67.45
Bra001614.1-P	Field mustard	cytosol	65.69	64.93
GSMUA_Achr4P20290_001	Banana	cytosol	53.67	57.01
GSMUA_Achr8P18500_001	Banana	mitochondrion	58.65	56.5
PGSC0003DMT400001716	Potato	cytosol	60.41	56.13
Solyc03g116760.2.1	Tomato	cytosol, endoplasmic reticulum	60.12	55.86
VIT_09s0002g07060.t01	Wine grape	cytosol	61.29	55.73
GSMUA_Achr6P35110_001	Banana	cytosol	58.36	54.52
GSMUA_Achr9P22520_001	Banana	mitochondrion	53.96	53.03
EES06400	Sorghum	nucleus	58.06	52.94
TraesCS6D01G164200.2	Wheat	nucleus	57.77	52.67
TraesCS6A01G180900.1	Wheat	nucleus	57.48	52.27
Os02t0186500-01	Rice	cytosol, plasma membrane	57.77	52.25
Zm00001d053725_P002	Maize	nucleus	57.48	51.99
Zm00001d015581_P001	Maize	cytosol	57.18	51.72
Zm00001d036300_P001	Maize	mitochondrion, nucleus, plastid	52.2	51.3
Os06t0166900-01	Rice	plasma membrane	53.08	49.32
TraesCS6B01G204600.3	Wheat	cytosol	56.89	48.62
EER87920	Sorghum	mitochondrion	52.2	48.5
TraesCS7B01G029200.1	Wheat	mitochondrion	51.91	48.23
TraesCS7A01G129300.1	Wheat	mitochondrion	51.61	48.09
TraesCS7D01G128300.1	Wheat	mitochondrion	51.61	48.09
Zm00001d045202_P002	Maize	mitochondrion	50.73	46.13
KRH04634	Soybean	mitochondrion	14.66	45.05
HORVU6Hr1G035880.2	Barley	plastid	57.18	42.21
HORVU7Hr1G027010.1	Barley	plastid	51.91	38.73
Bra014322.1-P	Field mustard	plasma membrane	31.38	19.42

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.44	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra030378	EnsemblPlants:Bra030378.1	EnsemblPlants:Bra030378.1-P
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4ENK8
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00109	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF88
InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_AS	UniParc:UPI0002547808	SEG:seg

Description

AT1G52540 (E=3e-137) | protein kinase, putative

Coordinates

chrA05:+:10719041..10720372

Molecular Weight (calculated)

38795.4 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.476

Length

341 amino acids

Sequence
(BLAST)

001: MLEFRRKKVK TEPSWRIFTL KELHAATNSF NYDNKLGEGR IGSVYWGQLS SGSQIAVKRL KAWNSGEETD FAVEVEILAR IRHKNLLSLR GYCAEGQERL
101: FVYEYMPNLS LVSHLHGLHS SESLLDWTRR MKIAVSCAQA IAYLHHHATP RIVHGDVRAS NVLLDSEFEA RVTDFGYGKL MPDEDGATKT TKGGNNIGYL
201: SPECIESGRG TYMGDVYSFG VVLLELVTGK RPIERLNQTR GITEWVLPLV YEKKYGDIVD PRLNGKYVEE ELKKVVLVAL MCAQSEPEKR PTMSEVVEML
301: MNESKEKMTY LEGTPLFNRN NAGEAIDEIS EEKQHQKQEQ E

Best Arabidopsis Sequence Match ( AT1G52540.2 )
(BLAST)

001: MLIWFDVTTL HRQKKVKTEP SWRIFSLKEL HAATNSFNYD NKLGEGRFGS VYWGQLWDGS QIAVKRLKAW SSREEIDFAV EVEILARIRH KNLLSVRGYC
101: AEGQERLIVY DYMPNLSLVS HLHGQHSSES LLDWTRRMNI AVSSAQAIAY LHHFATPRIV HGDVRASNVL LDSEFEARVT DFGYDKLMPD DGANKSTKGN
201: NIGYLSPECI ESGKESDMGD VYSFGVLLLE LVTGKRPTER VNLTTKRGIT EWVLPLVYER KFGEIVDQRL NGKYVEEELK RIVLVGLMCA QRESEKRPTM
301: SEVVEMLMIE SKEKMAQLEA NPLFNGNNDG EVIDESSEII SEVRDHQ

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LDB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.