Factsheet for VIT_09s0002g07060.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P20290_001	Banana	cytosol	68.0	79.44
KRH09718	Soybean	mitochondrion	77.07	78.75
KRH23586	Soybean	cytosol	76.27	77.93
Solyc03g116760.2.1	Tomato	cytosol, endoplasmic reticulum	73.6	75.2
PGSC0003DMT400001716	Potato	cytosol	73.33	74.93
GSMUA_Achr6P35110_001	Banana	cytosol	70.93	72.88
KRH44474	Soybean	mitochondrion	70.13	72.45
GSMUA_Achr9P22520_001	Banana	mitochondrion	65.6	70.89
KRH47436	Soybean	cytosol, mitochondrion, plastid	68.27	70.72
GSMUA_Achr8P18500_001	Banana	mitochondrion	66.13	70.06
TraesCS6D01G164200.2	Wheat	nucleus	69.6	69.79
TraesCS6A01G180900.1	Wheat	nucleus	69.33	69.33
Os02t0186500-01	Rice	cytosol, plasma membrane	68.8	68.44
EES06400	Sorghum	nucleus	68.0	68.18
Zm00001d015581_P001	Maize	cytosol	66.93	66.58
Zm00001d053725_P002	Maize	nucleus	66.13	65.78
TraesCS6B01G204600.3	Wheat	cytosol	69.07	64.91
AT1G52540.1	Thale cress	cytosol	60.53	64.86
Bra030378.1-P	Field mustard	cytosol	55.73	61.29
CDY40153	Canola	cytosol	53.07	60.67
CDY49913	Canola	cytosol	56.27	60.11
AT3G15890.1	Thale cress	cytosol	57.87	60.11
Bra018971.1-P	Field mustard	cytosol	53.33	59.17
CDY66888	Canola	cytosol	52.8	58.58
CDY21883	Canola	cytosol	52.8	58.41
CDX87914	Canola	cytosol	57.6	58.38
Bra001614.1-P	Field mustard	cytosol	52.8	57.39
Bra021143.1-P	Field mustard	cytosol	52.0	57.18
CDX82425	Canola	cytosol	52.53	57.1
CDX75852	Canola	cytosol	52.53	57.1
CDY20162	Canola	cytosol	50.13	56.46
HORVU6Hr1G035880.2	Barley	plastid	69.07	56.06
Zm00001d036300_P001	Maize	mitochondrion, nucleus, plastid	51.73	55.91
KRH47437	Soybean	mitochondrion	52.0	55.71
VIT_11s0052g01820.t01	Wine grape	cytosol	55.73	54.57
EER87920	Sorghum	mitochondrion	53.07	54.22
TraesCS7B01G029200.1	Wheat	mitochondrion	53.07	54.22
TraesCS7D01G128300.1	Wheat	mitochondrion	52.8	54.1
TraesCS7A01G129300.1	Wheat	mitochondrion	52.8	54.1
Os06t0166900-01	Rice	plasma membrane	51.73	52.86
Zm00001d045202_P002	Maize	mitochondrion	51.47	51.47
VIT_16s0022g02280.t01	Wine grape	cytosol	46.67	51.02
HORVU7Hr1G027010.1	Barley	plastid	52.8	43.33
VIT_16s0013g02130.t01	Wine grape	plasma membrane	28.53	19.24

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100252460	wikigene:100252460	MapMan:18.4.1.44	Gene3D:3.30.200.20	EMBL:AM486146
ProteinID:CAN66493	ProteinID:CAN66493.1	ProteinID:CCB59614	ProteinID:CCB59614.1	ncoils:Coil	UniProt:F6HXE4
EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100252460
wikigene:LOC100252460	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF88	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGR:TC52677	UniParc:UPI00015CCFAC	ArrayExpress:VIT_09s0002g07060	EnsemblPlantsGene:VIT_09s0002g07060	EnsemblPlants:VIT_09s0002g07060.t01
unigene:Vvi.2011	RefSeq:XP_002265603	RefSeq:XP_002265603.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:+:6967093..6976711

Molecular Weight (calculated)

41720.8 Da

IEP (calculated)

6.395

GRAVY (calculated)

-0.389

Length

375 amino acids

Sequence
(BLAST)

001: MAFCSMFCCG KGSDGKEQGK KEVTWRIFSL KELHAATNNF NYDNKLGEGG FGSVYWGQLW DGSQIAIKRL KVWSNKADME FAVEVEILAR VRHKNLLSLR
101: GYCAEGQERL IVYDYMPNLS LLSHLHGQHS AECHLDWNRR MNIAIGSAEG IVYLHHHATP HIIHRDIKAS NVLLDSEFQA QVADFGFAKL IPDGATHVTT
201: RVKGTLGYLA PEYAMFGKAS ESCDVYSFGI LLLELVSGKR PIEKMSSTMK RTITDWALPL ACEKKFNDLA DPKLNGKFVE EELKRVVLVA LVSADSKPEK
301: RPTMLEVLEL LKGNSKEKLA DLENNDLFKG PQTGGYTDGG TGPEASPDII SEENDTNEEL KEIKPDPGNP HPHGS

Best Arabidopsis Sequence Match ( AT1G52540.1 )
(BLAST)

001: MQIFSCFCCG KGFDRQKKVK TEPSWRIFSL KELHAATNSF NYDNKLGEGR FGSVYWGQLW DGSQIAVKRL KAWSSREEID FAVEVEILAR IRHKNLLSVR
101: GYCAEGQERL IVYDYMPNLS LVSHLHGQHS SESLLDWTRR MNIAVSSAQA IAYLHHFATP RIVHGDVRAS NVLLDSEFEA RVTDFGYDKL MPDDGANKST
201: KGNNIGYLSP ECIESGKESD MGDVYSFGVL LLELVTGKRP TERVNLTTKR GITEWVLPLV YERKFGEIVD QRLNGKYVEE ELKRIVLVGL MCAQRESEKR
301: PTMSEVVEML MIESKEKMAQ LEANPLFNGN NDGEVIDESS EIISEVRDHQ

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LDB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.