Factsheet for Bra018971.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66888	Canola	cytosol	99.11	99.11
AT1G52540.1	Thale cress	cytosol	79.88	77.14
Bra030378.1-P	Field mustard	cytosol	77.51	76.83
Bra021143.1-P	Field mustard	cytosol	68.05	67.45
Bra001614.1-P	Field mustard	cytosol	67.46	66.09
GSMUA_Achr4P20290_001	Banana	cytosol	52.96	55.76
GSMUA_Achr8P18500_001	Banana	mitochondrion	57.1	54.52
Solyc03g116760.2.1	Tomato	cytosol, endoplasmic reticulum	58.28	53.68
PGSC0003DMT400001716	Potato	cytosol	58.28	53.68
VIT_09s0002g07060.t01	Wine grape	cytosol	59.17	53.33
GSMUA_Achr6P35110_001	Banana	cytosol	57.4	53.15
GSMUA_Achr9P22520_001	Banana	mitochondrion	53.55	52.16
EES06400	Sorghum	nucleus	55.33	50.0
TraesCS6D01G164200.2	Wheat	nucleus	54.73	49.47
Os02t0186500-01	Rice	cytosol, plasma membrane	55.03	49.34
Zm00001d015581_P001	Maize	cytosol	55.03	49.34
TraesCS6A01G180900.1	Wheat	nucleus	54.44	49.07
Zm00001d053725_P002	Maize	nucleus	54.14	48.54
Os06t0166900-01	Rice	plasma membrane	52.07	47.96
Zm00001d036300_P001	Maize	mitochondrion, nucleus, plastid	48.82	47.55
TraesCS7B01G029200.1	Wheat	mitochondrion	51.48	47.41
TraesCS7A01G129300.1	Wheat	mitochondrion	50.89	46.99
TraesCS7D01G128300.1	Wheat	mitochondrion	50.89	46.99
EER87920	Sorghum	mitochondrion	50.59	46.59
TraesCS6B01G204600.3	Wheat	cytosol	54.44	46.12
Zm00001d045202_P002	Maize	mitochondrion	49.11	44.27
KRH04634	Soybean	mitochondrion	14.2	43.24
HORVU6Hr1G035880.2	Barley	plastid	54.14	39.61
HORVU7Hr1G027010.1	Barley	plastid	50.89	37.64
Bra014322.1-P	Field mustard	plasma membrane	31.95	19.6

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.44	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra018971	EnsemblPlants:Bra018971.1	EnsemblPlants:Bra018971.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4DR28	PFAM:PF07714
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00109	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF88
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_AS	UniParc:UPI000253E8A0

Description

AT1G52540 (E=9e-156) | protein kinase, putative

Coordinates

chrA06:+:947278..948686

Molecular Weight (calculated)

38061.6 Da

IEP (calculated)

7.554

GRAVY (calculated)

-0.406

Length

338 amino acids

Sequence
(BLAST)

001: MRFFSCFCCG KEFDRKKNVK TEQPSWREFT LKELHAATNS FNYDNKLGEG RFGSVYWGHL ADGSQIAVKR LKASREEISF AVEVNILGGT RHKNLLTARG
101: YCAEGQERLI VYEYMPNSSL VSHLHSSEPL LDWTKRMKIA VTSAQAIAYL HHHATPRIVH GDVRASNVLL DSEFEARVTD FGYGKLMPEE DGASKANNTG
201: YLSPECVESG RGSSMGDVYS FGVLLLELVT GKRPIERLNQ TIKRGITEWV LPLVYEKKYG EIVDQRLNGK YVDKELKKVV LVGLMCAQSE PEKRPTMSEV
301: VEMLMNESKE KMAYLEGIPL FNKNNGGEAV DKSSEILS

Best Arabidopsis Sequence Match ( AT1G52540.1 )
(BLAST)

001: MQIFSCFCCG KGFDRQKKVK TEPSWRIFSL KELHAATNSF NYDNKLGEGR FGSVYWGQLW DGSQIAVKRL KAWSSREEID FAVEVEILAR IRHKNLLSVR
101: GYCAEGQERL IVYDYMPNLS LVSHLHGQHS SESLLDWTRR MNIAVSSAQA IAYLHHFATP RIVHGDVRAS NVLLDSEFEA RVTDFGYDKL MPDDGANKST
201: KGNNIGYLSP ECIESGKESD MGDVYSFGVL LLELVTGKRP TERVNLTTKR GITEWVLPLV YERKFGEIVD QRLNGKYVEE ELKRIVLVGL MCAQRESEKR
301: PTMSEVVEML MIESKEKMAQ LEANPLFNGN NDGEVIDESS EIISEVRDHQ

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LDB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.