Factsheet for Solyc03g116760.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 29145071

msms PMID: 29145071 doi

P Ibort, H Imai, M Uemura, R Aroca

Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001716	Potato	cytosol	92.64	92.64
GSMUA_Achr4P20290_001	Banana	cytosol	67.03	76.64
KRH09718	Soybean	mitochondrion	75.75	75.75
KRH23586	Soybean	cytosol	75.75	75.75
VIT_09s0002g07060.t01	Wine grape	cytosol	75.2	73.6
KRH44474	Soybean	mitochondrion	72.48	73.28
KRH47436	Soybean	cytosol, mitochondrion, plastid	71.66	72.65
GSMUA_Achr6P35110_001	Banana	cytosol	70.57	70.96
GSMUA_Achr9P22520_001	Banana	mitochondrion	66.76	70.61
GSMUA_Achr8P18500_001	Banana	mitochondrion	66.21	68.64
TraesCS6D01G164200.2	Wheat	nucleus	69.21	67.91
TraesCS6A01G180900.1	Wheat	nucleus	68.94	67.47
EES06400	Sorghum	nucleus	68.66	67.38
Os02t0186500-01	Rice	cytosol, plasma membrane	68.94	67.11
Zm00001d015581_P001	Maize	cytosol	67.3	65.52
Zm00001d053725_P002	Maize	nucleus	67.03	65.25
AT1G52540.1	Thale cress	cytosol	60.22	63.14
TraesCS6B01G204600.3	Wheat	cytosol	68.12	62.66
CDY49913	Canola	cytosol	59.13	61.82
Bra030378.1-P	Field mustard	cytosol	55.86	60.12
CDY40153	Canola	cytosol	53.68	60.06
KRH04634	Soybean	mitochondrion	17.98	59.46
AT3G15890.1	Thale cress	cytosol	57.77	58.73
CDX87914	Canola	cytosol	59.13	58.65
CDY66888	Canola	cytosol	53.68	58.28
Bra018971.1-P	Field mustard	cytosol	53.68	58.28
KRH47437	Soybean	mitochondrion	54.77	57.43
CDY20162	Canola	cytosol	51.77	57.06
Bra021143.1-P	Field mustard	cytosol	52.86	56.89
Zm00001d036300_P001	Maize	mitochondrion, nucleus, plastid	53.68	56.77
CDY21883	Canola	cytosol	51.77	56.05
CDX75852	Canola	cytosol	51.23	54.49
CDX82425	Canola	cytosol	51.23	54.49
HORVU6Hr1G035880.2	Barley	plastid	68.39	54.33
Solyc03g006890.1.1	Tomato	cytosol	53.95	54.25
EER87920	Sorghum	mitochondrion	54.22	54.22
Solyc07g006610.2.1	Tomato	cytosol	56.13	53.37
Bra001614.1-P	Field mustard	cytosol	50.14	53.33
TraesCS7B01G029200.1	Wheat	mitochondrion	52.59	52.59
TraesCS7A01G129300.1	Wheat	mitochondrion	52.32	52.46
TraesCS7D01G128300.1	Wheat	mitochondrion	52.32	52.46
Os06t0166900-01	Rice	plasma membrane	52.04	52.04
Zm00001d045202_P002	Maize	mitochondrion	52.04	50.93
HORVU7Hr1G027010.1	Barley	plastid	52.86	42.45
Solyc02g068370.2.1	Tomato	nucleus, plasma membrane	30.25	20.4

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.44	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
UniProt:K4BLH8	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF88	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc03g116760.2	EnsemblPlants:Solyc03g116760.2.1	UniParc:UPI00027690FA	SEG:seg

Description

No Description!

Coordinates

chr3:-:66046660..66051410

Molecular Weight (calculated)

40999.1 Da

IEP (calculated)

6.297

GRAVY (calculated)

-0.282

Length

367 amino acids

Sequence
(BLAST)

001: MDFSSIFCCV KGSDRKGQAK KQPTWRVFSL KELHSATNNF NYDNKLGEGG FGSVYWGQLW DGSQIAVKRL KVWSNKAEME FAVEVEILAR VRHKNLLSLR
101: GYCAEGQERL IVYDYMPNLS LLSHLHGQHS AESLLDWKRR MNVAIGSAEG IAYLHHHATP HIIHRDIKAS NVLLDSDFQA QVADFGFAKF IPDGATHVTT
201: RVKGTLGYLA PEYAMLGKAS ESCDVYSFGI LLLELASGKK PIEKVNLTVK RTITDWALPL VCEGKLSELA DPRLSGNYVE EEFKRVVLVA LVCAQNRPEK
301: RPTMLDVIEL LKGEAKEKFT ALENDDMFKI PPVVDDDVLS GTEGNADSTA SEEKEPKPEI EKVEVQA

Best Arabidopsis Sequence Match ( AT1G52540.1 )
(BLAST)

001: MQIFSCFCCG KGFDRQKKVK TEPSWRIFSL KELHAATNSF NYDNKLGEGR FGSVYWGQLW DGSQIAVKRL KAWSSREEID FAVEVEILAR IRHKNLLSVR
101: GYCAEGQERL IVYDYMPNLS LVSHLHGQHS SESLLDWTRR MNIAVSSAQA IAYLHHFATP RIVHGDVRAS NVLLDSEFEA RVTDFGYDKL MPDDGANKST
201: KGNNIGYLSP ECIESGKESD MGDVYSFGVL LLELVTGKRP TERVNLTTKR GITEWVLPLV YERKFGEIVD QRLNGKYVEE ELKRIVLVGL MCAQRESEKR
301: PTMSEVVEML MIESKEKMAQ LEANPLFNGN NDGEVIDESS EIISEVRDHQ

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LDB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.