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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • plasma membrane 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:plasma membrane
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400070632 Potato cytosol 92.75 91.56
VIT_11s0052g01820.t01 Wine grape cytosol 74.87 75.46
KRH18977 Soybean cytosol 73.32 74.47
KRH02919 Soybean cytosol, plastid 70.98 65.71
Solyc03g006890.1.1 Tomato cytosol 53.89 56.99
Solyc03g116760.2.1 Tomato cytosol, endoplasmic reticulum 53.37 56.13
Solyc02g068370.2.1 Tomato nucleus, plasma membrane 26.17 18.57
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.44Gene3D:3.30.200.20GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0004675GO:GO:0004871GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0007166GO:GO:0007178GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0038023InterPro:IPR000719
UniProt:K4CBD2InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF178InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:Solyc07g006610.2EnsemblPlants:Solyc07g006610.2.1UniParc:UPI000276C79FSEG:seg
Description
No Description!
Coordinates
chr7:+:1469689..1473103
Molecular Weight (calculated)
43461.1 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.414
Length
386 amino acids
Sequence
(BLAST)
001: MGSSFSCCGD EKVDEGQNNE LVGENSWRIF TYKELYAATN GFSENYKLGE GGFGSVYWGK TSDGLQIAVK KLKSMNSKAE MEFAVEVEVL GRVRHKNLLG
101: LRGYCAGNEQ RLIVYDYMPN LSLLSHLHGH LSREVQLDWK KRMKIAIGSA EGLLYLHHEV SPHIIHRDIK ASNVLLDSNF EPLVADFGFA KLIPEGVSHM
201: TTRVKGTLGY LAPEYAMWGK VSESCDVYSF GVLLLELITG RKPIEKLPNG VKRTITEWME PMIAKEKFKD LVDPRLKGNF DEIQLKQSIR VAALCVQSEP
301: DKRPTMKEVV CILKGEEVNN VVKANHENLR IQSVRYGDDL LALDQTSDQE DNESSSDKGN ESSVYGVFGA MEMKKMQDPY KRFGDK
Best Arabidopsis Sequence Match ( AT1G52540.1 )
(BLAST)
001: MQIFSCFCCG KGFDRQKKVK TEPSWRIFSL KELHAATNSF NYDNKLGEGR FGSVYWGQLW DGSQIAVKRL KAWSSREEID FAVEVEILAR IRHKNLLSVR
101: GYCAEGQERL IVYDYMPNLS LVSHLHGQHS SESLLDWTRR MNIAVSSAQA IAYLHHFATP RIVHGDVRAS NVLLDSEFEA RVTDFGYDKL MPDDGANKST
201: KGNNIGYLSP ECIESGKESD MGDVYSFGVL LLELVTGKRP TERVNLTTKR GITEWVLPLV YERKFGEIVD QRLNGKYVEE ELKRIVLVGL MCAQRESEKR
301: PTMSEVVEML MIESKEKMAQ LEANPLFNGN NDGEVIDESS EIISEVRDHQ
Arabidopsis Description
Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LDB7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.