Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • plasma membrane 1
  • cytosol 3
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:plastid
EpiLoc:plasma membrane
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400092156 Potato cytosol 73.7 81.76
KRH09180 Soybean cytosol 65.48 73.77
KRG91411 Soybean cytosol 67.95 73.16
KRH38660 Soybean cytosol 65.75 68.38
KRH35406 Soybean cytosol 68.22 68.22
VIT_16s0022g02280.t01 Wine grape cytosol 60.27 64.14
Solyc03g116760.2.1 Tomato cytosol, endoplasmic reticulum 54.25 53.95
Solyc07g006610.2.1 Tomato cytosol 56.99 53.89
Solyc02g068370.2.1 Tomato nucleus, plasma membrane 26.03 17.46
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.44Gene3D:3.30.200.20GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0004675GO:GO:0004871GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0007166GO:GO:0007178GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0038023InterPro:IPR000719
UniProt:K4BEB2InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF139InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:Solyc03g006890.1EnsemblPlants:Solyc03g006890.1.1UniParc:UPI0002767D6B:
Description
No Description!
Coordinates
chr3:+:1423023..1425234
Molecular Weight (calculated)
41504.0 Da
IEP (calculated)
8.531
GRAVY (calculated)
-0.391
Length
365 amino acids
Sequence
(BLAST)
001: MFKRCFNCFG GEQKLEISGQ IKNRDYPWDI YTLKELVNAT NNFHNDNKIG EGGFGSVYWG RTSKGIEIAV KRLKAMSAKA EMEFAIEVEI LGRVRHKNLL
101: GLRGFYAGED ERLIVYDYMP NHSLITHLHG TLSADCLLDW PRRMKIAMGS ADGLCYLHHE ANPHIIHRDI KASNVLLDSN FQAKVADFGF AKLIPDGVTH
201: LTTRVKGTLG YLAPEYAMWG KVSESCDVYS FGILLLEIIS ARKPLEKLAN GVKRDIVQWA LPYIQKGDFN HIADPRLKGK FNLQQLKNTI LIAIKCTDGN
301: PENRPSMLQV VDWLNNIIVM EKRKKDIKIV KNISTSTNYV DENENNDYVG DDYETNNEGS MKRKN
Best Arabidopsis Sequence Match ( AT3G15890.1 )
(BLAST)
001: MQLLNSCCGK GFDGKKKEKE EPSWRVFSLK ELHAATNSFN YDNKLGEGRF GSVYWGQLWD GSQIAVKRLK EWSNREEIDF AVEVEILARI RHKNLLSVRG
101: YCAEGQERLL VYEYMQNLSL VSHLHGQHSA ECLLDWTKRM KIAISSAQAI AYLHDHATPH IVHGDVRASN VLLDSEFEAR VTDFGYGKLM PDDDTGDGAT
201: KAKSNNGYIS PECDASGKES ETSDVYSFGI LLMVLVSGKR PLERLNPTTT RCITEWVLPL VYERNFGEIV DKRLSEEHVA EKLKKVVLVG LMCAQTDPDK
301: RPTMSEVVEM LVNESKEKIS ELEANPLFKN PYSSNENNRE HVAEESSDVI LEDKDHQQQQ E
Arabidopsis Description
PTI1-like tyrosine-protein kinase At3g15890 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSC2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.