Factsheet for VIT_16s0022g02280.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09180	Soybean	cytosol	61.22	64.81
KRG91411	Soybean	cytosol	63.56	64.31
KRH38660	Soybean	cytosol	61.81	60.4
Solyc03g006890.1.1	Tomato	cytosol	64.14	60.27
KRH35406	Soybean	cytosol	63.85	60.0
PGSC0003DMT400092156	Potato	cytosol	56.85	59.27
VIT_11s0052g01820.t01	Wine grape	cytosol	55.98	50.13
VIT_09s0002g07060.t01	Wine grape	cytosol	51.02	46.67
VIT_16s0013g02130.t01	Wine grape	plasma membrane	25.95	16.01

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CBI24473	ProteinID:CBI24473.3	UniProt:D7T1U3
EMBL:FN595506	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF07714
ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF139	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0001BE2492	ArrayExpress:VIT_16s0022g02280	EnsemblPlantsGene:VIT_16s0022g02280	EnsemblPlants:VIT_16s0022g02280.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr16:+:14790215..14791748

Molecular Weight (calculated)

38720.3 Da

IEP (calculated)

7.340

GRAVY (calculated)

-0.477

Length

343 amino acids

Sequence
(BLAST)

001: MTWTCFCCIS QEHSEASVKN NSKDYPWEIY SLKELLQATD NFHETKKIGE GGFGSVYCGR TSKGVEIAVK RLKAMSAKAE MEFAVEVEIL GRVRHKNLLG
101: LRGFYAGGDE RLIVYDFMAN QSLITHLHGQ LSAECLLDWP RRMNIALGSA EGVAYLHHEA NPHIIHRDIK AIKGTLGYLA PEYAMWGKVS ESCDVYSFGI
201: LLLEIISAKK PIEKLPGGVK RDIVQWATPY VQKGAYHHIA DPRLKGKFDR SQLKLAITVA MKCTDNNPDN RPSMMEVVGW LKGDVGRRKN EVIYAKDGVA
301: KHENSDYDDD DDDNDKDNDT DYELGFGTTK SDIRVIRPRS RMR

Best Arabidopsis Sequence Match ( AT3G15890.1 )
(BLAST)

001: MQLLNSCCGK GFDGKKKEKE EPSWRVFSLK ELHAATNSFN YDNKLGEGRF GSVYWGQLWD GSQIAVKRLK EWSNREEIDF AVEVEILARI RHKNLLSVRG
101: YCAEGQERLL VYEYMQNLSL VSHLHGQHSA ECLLDWTKRM KIAISSAQAI AYLHDHATPH IVHGDVRASN VLLDSEFEAR VTDFGYGKLM PDDDTGDGAT
201: KAKSNNGYIS PECDASGKES ETSDVYSFGI LLMVLVSGKR PLERLNPTTT RCITEWVLPL VYERNFGEIV DKRLSEEHVA EKLKKVVLVG LMCAQTDPDK
301: RPTMSEVVEM LVNESKEKIS ELEANPLFKN PYSSNENNRE HVAEESSDVI LEDKDHQQQQ E

Arabidopsis Description

PTI1-like tyrosine-protein kinase At3g15890 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.