Factsheet for VIT_11s0052g01820.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18977	Soybean	cytosol	78.85	79.47
Solyc07g006610.2.1	Tomato	cytosol	75.46	74.87
PGSC0003DMT400070632	Potato	cytosol	73.37	71.87
KRH02919	Soybean	cytosol, plastid	76.24	70.02
VIT_16s0022g02280.t01	Wine grape	cytosol	50.13	55.98
VIT_09s0002g07060.t01	Wine grape	cytosol	54.57	55.73
VIT_16s0013g02130.t01	Wine grape	plasma membrane	26.37	18.17

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100256439	wikigene:100256439	MapMan:18.4.1.44	Gene3D:3.30.200.20	ProteinID:CCB44590
ProteinID:CCB44590.1	UniProt:F6GXA4	EMBL:FN594964	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100256439	wikigene:LOC100256439	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF178	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015CB6FC	ArrayExpress:VIT_11s0052g01820
EnsemblPlantsGene:VIT_11s0052g01820	EnsemblPlants:VIT_11s0052g01820.t01	RefSeq:XP_002271881	RefSeq:XP_002271881.1	SEG:seg	:

Description

No Description!

Coordinates

chr11:-:19634470..19636639

Molecular Weight (calculated)

42998.8 Da

IEP (calculated)

6.198

GRAVY (calculated)

-0.342

Length

383 amino acids

Sequence
(BLAST)

001: MGSSLSCCGA EKVDEGVTLV GVNSPWRIFS YKELYTATNG FSEENKLGEG GFGSVYWGKT TDGLQIAVKK LKAMNSKAEM EFAVEVEVLG RVRHKNLLGL
101: RGYCVGTDQR LIVYDYMPNL SLLSYLHGQF SSQVQLDWRR RMKIIIGSAE GLLYLHHEVT PHIIHRDIKA SNVLLDSDFE PLVADFGFAK LIPEGVSHMT
201: TRVKGTLGYL APEYAMWGKV SESCDVYSFG ILLLEILTGK KPIEKLPGGV KRTITEWAEP LIIKGRFKDL VDPRLRGNFD ENQLRQAINV AALCVQNECE
301: KRPNMKEVVS LLKGYQPKDK VTQMRMESVK YGEELLALDQ GSGDDDDDDD NDPDESKGYG VFGAMEVQKM PEPRIRRGDR RIM

Best Arabidopsis Sequence Match ( AT1G52540.1 )
(BLAST)

001: MQIFSCFCCG KGFDRQKKVK TEPSWRIFSL KELHAATNSF NYDNKLGEGR FGSVYWGQLW DGSQIAVKRL KAWSSREEID FAVEVEILAR IRHKNLLSVR
101: GYCAEGQERL IVYDYMPNLS LVSHLHGQHS SESLLDWTRR MNIAVSSAQA IAYLHHFATP RIVHGDVRAS NVLLDSEFEA RVTDFGYDKL MPDDGANKST
201: KGNNIGYLSP ECIESGKESD MGDVYSFGVL LLELVTGKRP TERVNLTTKR GITEWVLPLV YERKFGEIVD QRLNGKYVEE ELKRIVLVGL MCAQRESEKR
301: PTMSEVVEML MIESKEKMAQ LEANPLFNGN NDGEVIDESS EIISEVRDHQ

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LDB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.