CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49913	Canola	cytosol	84.05	88.6
AT1G52540.1	Thale cress	cytosol	76.76	81.14
CDY40153	Canola	cytosol	71.62	80.79
CDY66888	Canola	cytosol	71.35	78.11
CDY21883	Canola	cytosol	63.51	69.32
CDX75852	Canola	cytosol	62.97	67.54
CDX82425	Canola	cytosol	62.97	67.54
CDY20162	Canola	cytosol	59.46	66.07
PGSC0003DMT400001716	Potato	cytosol	58.65	59.13
Solyc03g116760.2.1	Tomato	cytosol, endoplasmic reticulum	58.65	59.13
GSMUA_Achr4P20290_001	Banana	cytosol	50.27	57.94
GSMUA_Achr8P18500_001	Banana	mitochondrion	55.41	57.91
VIT_09s0002g07060.t01	Wine grape	cytosol	58.38	57.6
GSMUA_Achr6P35110_001	Banana	cytosol	54.59	55.34
GSMUA_Achr9P22520_001	Banana	mitochondrion	51.35	54.76
TraesCS6D01G164200.2	Wheat	nucleus	54.59	54.01
Os02t0186500-01	Rice	cytosol, plasma membrane	54.86	53.85
TraesCS6A01G180900.1	Wheat	nucleus	54.32	53.6
EES06400	Sorghum	nucleus	53.51	52.94
Zm00001d053725_P002	Maize	nucleus	53.51	52.52
Zm00001d015581_P001	Maize	cytosol	52.7	51.72
Zm00001d036300_P001	Maize	mitochondrion, nucleus, plastid	47.84	51.01
TraesCS6B01G204600.3	Wheat	cytosol	54.05	50.13
Os06t0166900-01	Rice	plasma membrane	49.46	49.86
EER87920	Sorghum	mitochondrion	48.38	48.77
TraesCS7B01G029200.1	Wheat	mitochondrion	48.11	48.5
TraesCS7A01G129300.1	Wheat	mitochondrion	47.57	48.09
TraesCS7D01G128300.1	Wheat	mitochondrion	47.57	48.09
KRH04634	Soybean	mitochondrion	14.32	47.75
Zm00001d045202_P002	Maize	mitochondrion	46.22	45.6
HORVU6Hr1G035880.2	Barley	plastid	53.78	43.07
HORVU7Hr1G027010.1	Barley	plastid	47.84	38.73
CDY47532	Canola	plasma membrane	29.19	19.67
CDY02544	Canola	plasma membrane	28.92	19.6

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.44	Gene3D:3.30.200.20	GO:A0A078DHJ7	EnsemblPlants:CDX87914	ProteinID:CDX87914
ProteinID:CDX87914.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00147168001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00109	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF88	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_AS
UniParc:UPI0004EF4A5E	SEG:seg	:	:	:	:

Description

BnaC06g09760D

Coordinates

chrLK031852:-:1463783..1465318

Molecular Weight (calculated)

42156.5 Da

IEP (calculated)

6.892

GRAVY (calculated)

-0.380

Length

370 amino acids

Sequence
(BLAST)

001: MQFFCCFCCG KGSNGRKKVK TEPSWRIFTL KELHAATNSF NYDNKLGEGR FGSVYWGQLS SGSQIAVKRL KEWSSGQETD FAVEVEILAR IRHKNLLSLR
101: GYCAEGQERL FVYEYMPNLS LVSHLHGLHS SESLLDWTRR MNIAVSSAQA IAYLHHHATP RIVHGDVRAS NVLLDSEFEA RVTDFGYCKL MPDEDGATKT
201: TKGANNIGYL SPECIESVRG SYMGDVYCFG VVLLELVTGK RPIERLNQIT KRGITEWVLP LVYEKKYGDI VDQRLSGKYV EEELKRVVLV ALMCAQNEPE
301: KRPTMSEVVE MLMNESKEKM TYLEGTPLFN RNNGGEAIDE IPEEKEHQRQ DQEQIKKSLL FGFTHSLFLL

Best Arabidopsis Sequence Match ( AT1G52540.1 )
(BLAST)

001: MQIFSCFCCG KGFDRQKKVK TEPSWRIFSL KELHAATNSF NYDNKLGEGR FGSVYWGQLW DGSQIAVKRL KAWSSREEID FAVEVEILAR IRHKNLLSVR
101: GYCAEGQERL IVYDYMPNLS LVSHLHGQHS SESLLDWTRR MNIAVSSAQA IAYLHHFATP RIVHGDVRAS NVLLDSEFEA RVTDFGYDKL MPDDGANKST
201: KGNNIGYLSP ECIESGKESD MGDVYSFGVL LLELVTGKRP TERVNLTTKR GITEWVLPLV YERKFGEIVD QRLNGKYVEE ELKRIVLVGL MCAQRESEKR
301: PTMSEVVEML MIESKEKMAQ LEANPLFNGN NDGEVIDESS EIISEVRDHQ

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LDB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.