CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046926_P001	Maize	cytosol, plastid	87.64	89.7
HORVU7Hr1G038240.1	Barley	cytosol, plastid	73.23	74.42
HORVU7Hr1G111330.2	Barley	cytosol, plastid	73.23	74.42
TraesCS7D01G484900.1	Wheat	cytosol	75.06	74.38
TraesCS7B01G404400.1	Wheat	cytosol	74.6	74.09
TraesCS7A01G497600.1	Wheat	cytosol	74.14	73.64
GSMUA_Achr2P04980_001	Banana	cytosol	62.47	72.41
KXG36063	Sorghum	cytosol, plastid	46.91	53.11
EES06400	Sorghum	nucleus	44.85	52.41
Os06t0654600-00	Rice	cytosol	44.62	48.75
EER87920	Sorghum	mitochondrion	35.7	42.51
EES00463	Sorghum	plasma membrane	24.03	18.92

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.44	Gene3D:3.30.200.20	UniProt:C5Z774	EnsemblPlants:EER88757	ProteinID:EER88757
ProteinID:EER88757.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF178
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3010G213900	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A88EC1	RefSeq:XP_002437390.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:55680090..55682020

Molecular Weight (calculated)

47686.4 Da

IEP (calculated)

4.829

GRAVY (calculated)

-0.292

Length

437 amino acids

Sequence
(BLAST)

001: MGSSLSSCCG SEKVEQGCVS SSPMSSTWRI FSYKELHAAT NGFSEENKLG EGGFGSVYWG KTSDGLQIAV KKLKATNNSK AEMEFAVEVE VLARVRHRNL
101: LGLRGYCAGA DQRMIVYDYM PNLSLLSHLH GQFAGEVQLD WKRRVAVAVG SAEGLVYLHH EAAPHIIHRD IKASNVLLDS DFAPLVADFG FAKLVPEGVS
201: HMTTRVKGTL GYLAPEYAMW GKVSGACDVY SFGILLLELV SGRKPIERLP SGAKRTITEW AEPLIARGRL GDLVDPRLRG AFDAAQLARV VECAALCVQG
301: EPDRRPDMRT VVRILRGENV AAAAAAAAAA TVGARGGGKG EQKVPVRIES VKYADRLMEM DKSSSYYDEP QDGDEEEEEE EEEEEGDDID DDEVEEYSLI
401: DDKSSMNFGA FGAMPVQQTM QDPYVKRFSG NANAIKI

Best Arabidopsis Sequence Match ( AT1G52540.1 )
(BLAST)

001: MQIFSCFCCG KGFDRQKKVK TEPSWRIFSL KELHAATNSF NYDNKLGEGR FGSVYWGQLW DGSQIAVKRL KAWSSREEID FAVEVEILAR IRHKNLLSVR
101: GYCAEGQERL IVYDYMPNLS LVSHLHGQHS SESLLDWTRR MNIAVSSAQA IAYLHHFATP RIVHGDVRAS NVLLDSEFEA RVTDFGYDKL MPDDGANKST
201: KGNNIGYLSP ECIESGKESD MGDVYSFGVL LLELVTGKRP TERVNLTTKR GITEWVLPLV YERKFGEIVD QRLNGKYVEE ELKRIVLVGL MCAQRESEKR
301: PTMSEVVEML MIESKEKMAQ LEANPLFNGN NDGEVIDESS EIISEVRDHQ

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LDB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.