Factsheet for PGSC0003DMT400024351

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g068370.2.1	Tomato	nucleus, plasma membrane	90.69	91.36
VIT_16s0013g02130.t01	Wine grape	plasma membrane	68.98	67.99
GSMUA_Achr10P...	Banana	plasma membrane	64.6	63.78
KRH37541	Soybean	plasma membrane	63.32	63.67
KRH12592	Soybean	plasma membrane	63.32	63.44
TraesCS3B01G093800.2	Wheat	plasma membrane	61.86	61.52
TraesCS3D01G079200.2	Wheat	plasma membrane	61.68	61.34
TraesCS3A01G078700.1	Wheat	plasma membrane	60.95	60.29
Os01t0104000-01	Rice	plasma membrane	60.95	60.18
CDY47532	Canola	plasma membrane	60.22	60.11
CDY02544	Canola	plasma membrane	59.67	59.89
AT1G52310.1	Thale cress	plasma membrane	60.22	59.78
Bra014322.1-P	Field mustard	plasma membrane	59.85	59.53
Zm00001d040192_P001	Maize	plasma membrane	60.22	59.46
EES00463	Sorghum	plasma membrane	58.76	58.02
HORVU3Hr1G014230.1	Barley	cytosol, mitochondrion, plasma membrane	61.5	54.89
PGSC0003DMT400001716	Potato	cytosol	20.26	30.25
PGSC0003DMT400092156	Potato	cytosol	15.51	25.84
PGSC0003DMT400070632	Potato	cytosol	17.88	25.06

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.27	Gene3D:3.10.100.10	Gene3D:3.30.200.20	InterPro:C-type_lectin-like	InterPro:C-type_lectin-like/link_sf
InterPro:CTDL_fold	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004713
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0018108	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001304	InterPro:IPR016186	InterPro:Kinase-like_dom_sf
UniProt:M1AJY8	PFAM:PF00059	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400009417	PGSC:PGSC0003DMG400009417	EnsemblPlants:PGSC0003DMT400024351
ScanProsite:PS00109	PFscan:PS50011	PFscan:PS50041	PANTHER:PTHR27001	PANTHER:PTHR27001:SF85	InterPro:Prot_kinase_dom
SMART:SM00034	SMART:SM00219	SUPFAM:SSF56112	SUPFAM:SSF56436	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM
TMHMM:TMhelix	InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom	UniParc:UPI0002951EA5	SEG:seg	:

Description

Kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400009417]

Coordinates

chr2:+:27092727..27100291

Molecular Weight (calculated)

61070.7 Da

IEP (calculated)

9.297

GRAVY (calculated)

-0.136

Length

548 amino acids

Sequence
(BLAST)

001: MAVKPLFPLF LLTCFLLHLC ASTSVPNKTL DSQIVSSSGN QSHDDAGRCD PGWFSSPNGK KCFKYNATSL QWNESETYCN GFGGNLAAIA SSEELNFVQK
101: LCGNDSNGCW VGGRSINTTA GLGWKWSDNA SSWNESIAPK TTLDSSCKNF SCYGFKSVDL CTSITNGAII AERCNVTHAS ICTLDAGSKC RHMRCHREYL
201: IILAVVSGLI LCTTLAIVIW LLVFRRSKRR KRSSRASLAL VPPSWKIFNR DEVKSMTKNF SEANRLLGDA KTGGTYSGLL PDGSRVAVKR LKRCGIQRKK
301: EFYSEIGRVA RLHHSNLVSI KGCCYHHGDR YILYEFIING PLDRWLHHIP RGGRSLDWSM RMKVATTLAQ GIAFLHDKMK PQVVHRDIRA SNVLLDEDFG
401: AHLMGVGLSK FVPWEIMHER RVMAGGTHGY LAPEFVYRNE LTTKSDVYSF GVLLLEIISG RRPAQAVDSV GWQSIFEWAT PLVQAHRYVE LLDPLISSSS
501: SSQIPEVGVI QKVVDLVYSC TQHVPSMRPR MSHVVHQLQQ LAQPPIVK

Best Arabidopsis Sequence Match ( AT1G52310.1 )
(BLAST)

001: MELKWVSCRK QSLFLISCLA LLCLASLDTI SCESTQNATD FKKRSQTVSC PPDWIIGPNQ TKCYAYFKNS TSWEKSEMFC RTYGGHLASL ASSKELSFVQ
101: KLCNGNVSSC WIGGRSMNSS TSGFRWSWSD PKTPQWNQSM FPKVPIRTRC GNGNGSSSCR ANICIAVTNG SSSIFGERCN ASHAFVCAVD SDIKCRNCHK
201: YLVILAVVSG LILFTTFAII LWLLVYKRSK KRRKSRKVSN PASSSSVVPP SWKIFTSEEL RSMTKNFSEA NRLAGDAKTG GTYSGGLSDG TKVAVKRLKR
301: SSFQRKKEFY SEIRRAAKLY HPNVVAIKGC CYDHGERFIV YEFIASGPLD RWLHHVPRGG RSLDWNMRLN IATTLAQGIA FLHDKVKPQV VHRDIRASNV
401: LLDEEFGAHL MGVGLSKFVP WEVMQERTVM AGGTYGYLAP EYVYRNELTT KSDVYSFGVL LLEIVSGRRP TQAVNSSVGW QSIFEWATPL VQANRWLEIL
501: DPVITCGLPE ACVVQKVVDL VYSCTQNVPS MRPRMSHVVH QLQQLVQPLE VK

Arabidopsis Description

C-type lectin receptor-like tyrosine-protein kinase At1g52310 [Source:UniProtKB/Swiss-Prot;Acc:Q9C823]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.