Factsheet for TraesCS3B01G093800.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G079200.2	Wheat	plasma membrane	97.46	97.46
TraesCS3A01G078700.1	Wheat	plasma membrane	96.19	95.67
HORVU3Hr1G014230.1	Barley	cytosol, mitochondrion, plasma membrane	96.01	86.16
Zm00001d040192_P001	Maize	plasma membrane	81.49	80.9
Os01t0104000-01	Rice	plasma membrane	80.94	80.36
EES00463	Sorghum	plasma membrane	79.49	78.92
GSMUA_Achr10P...	Banana	plasma membrane	74.59	74.05
VIT_16s0013g02130.t01	Wine grape	plasma membrane	66.42	65.83
PGSC0003DMT400024351	Potato	plasma membrane	61.52	61.86
Solyc02g068370.2.1	Tomato	nucleus, plasma membrane	60.98	61.76
KRH37541	Soybean	plasma membrane	60.98	61.65
KRH12592	Soybean	plasma membrane	60.8	61.24
AT1G52310.1	Thale cress	plasma membrane	58.98	58.88
CDY47532	Canola	plasma membrane	58.62	58.83
CDY02544	Canola	plasma membrane	57.71	58.24
Bra014322.1-P	Field mustard	plasma membrane	57.89	57.89
TraesCS6B01G204600.3	Wheat	cytosol	20.15	27.82
TraesCS7B01G029200.1	Wheat	mitochondrion	17.79	26.7
TraesCS5B01G319800.1	Wheat	cytosol	18.33	26.65
TraesCS7B01G404400.1	Wheat	cytosol	18.87	23.64

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.27	Gene3D:3.10.100.10	Gene3D:3.30.200.20	InterPro:C-type_lectin-like	InterPro:C-type_lectin-like/link_sf
InterPro:CTDL_fold	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004713
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001304
InterPro:IPR016186	InterPro:Kinase-like_dom_sf	PFAM:PF00059	PFAM:PF07714	ScanProsite:PS00109	PFscan:PS50011
PFscan:PS50041	PANTHER:PTHR27006	PANTHER:PTHR27006:SF5	InterPro:Prot_kinase_dom	SMART:SM00034	SMART:SM00219
SUPFAM:SSF56112	SUPFAM:SSF56436	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G093800
EnsemblPlants:TraesCS3B01G093800.2	InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom	TIGR:cd00037	SEG:seg	:

Description

No Description!

Coordinates

chr3B:+:62945292..62948366

Molecular Weight (calculated)

60818.2 Da

IEP (calculated)

8.958

GRAVY (calculated)

-0.131

Length

551 amino acids

Sequence
(BLAST)

001: MAMPLALVLA ALLLSAAAPA LAHTPSCPDG WQISPDRLKC FMHISSSLSW DGSEALCRNF SGHLAALSSV QELNFARSLC GAASSGCWVG GRRHNTTGSV
101: GGWKWSDNSS SWNETAFPGE PLHPNCTGAR CGLAASDDMC TLVTSKHTAL TGKKCAESHG LICMMNHEDR CYHDHCHKEY FIVLIVVSGL ILSTTLAVVV
201: WLLVYKRSKK RKRSREASGA SATALVPPLW KVFNSEELRS ITKNFSEGNR LPGNAKTGGT YSGTLPDGSK LAIKRLKRSS LQRKKDFYSE ISRVAKLYHP
301: NLVAVKGCCY DHGDRFIVYE FVANGPLDVW LHHIPRGGRS LDWATRMRVA TTLAQGIAFL HDKVKPQVVH RDIRASNVLL DEEFGSHLMG VGLSKFVPWE
401: VMHERTVKAA TYGYLAPEFI YRNELTTKSD VYSFGVLLLE IISGRRPAQS VESAGWQTIF EWATPLVQSH RHLELLDPLI NDLPEIGVIQ KVVDLVYACT
501: QHVPSVRPRM SHVVHQLQQL ELKSAASEQL RSGTSTSATS PMLPLEVRTP R

Best Arabidopsis Sequence Match ( AT1G52310.1 )
(BLAST)

001: MELKWVSCRK QSLFLISCLA LLCLASLDTI SCESTQNATD FKKRSQTVSC PPDWIIGPNQ TKCYAYFKNS TSWEKSEMFC RTYGGHLASL ASSKELSFVQ
101: KLCNGNVSSC WIGGRSMNSS TSGFRWSWSD PKTPQWNQSM FPKVPIRTRC GNGNGSSSCR ANICIAVTNG SSSIFGERCN ASHAFVCAVD SDIKCRNCHK
201: YLVILAVVSG LILFTTFAII LWLLVYKRSK KRRKSRKVSN PASSSSVVPP SWKIFTSEEL RSMTKNFSEA NRLAGDAKTG GTYSGGLSDG TKVAVKRLKR
301: SSFQRKKEFY SEIRRAAKLY HPNVVAIKGC CYDHGERFIV YEFIASGPLD RWLHHVPRGG RSLDWNMRLN IATTLAQGIA FLHDKVKPQV VHRDIRASNV
401: LLDEEFGAHL MGVGLSKFVP WEVMQERTVM AGGTYGYLAP EYVYRNELTT KSDVYSFGVL LLEIVSGRRP TQAVNSSVGW QSIFEWATPL VQANRWLEIL
501: DPVITCGLPE ACVVQKVVDL VYSCTQNVPS MRPRMSHVVH QLQQLVQPLE VK

Arabidopsis Description

C-type lectin receptor-like tyrosine-protein kinase At1g52310 [Source:UniProtKB/Swiss-Prot;Acc:Q9C823]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.