Factsheet for TraesCS5B01G319800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G081490.1	Barley	cytosol	37.73	97.28
TraesCS5D01G325600.1	Wheat	cytosol	93.4	91.71
TraesCS5A01G319400.1	Wheat	cytosol	93.14	91.45
Os09t0531701-00	Rice	cytosol	77.57	79.89
Zm00001d021286_P001	Maize	plastid	79.16	76.14
KXG36063	Sorghum	cytosol, plastid	77.31	75.91
GSMUA_AchrUn_...	Banana	cytosol	55.41	63.83
TraesCS6B01G204600.3	Wheat	cytosol	47.49	45.11
TraesCS7B01G404400.1	Wheat	cytosol	51.98	44.77
GSMUA_Achr7P05710_001	Banana	mitochondrion	48.02	41.94
TraesCS7B01G029200.1	Wheat	mitochondrion	39.84	41.14
TraesCS3B01G093800.2	Wheat	plasma membrane	26.65	18.33
Os09t0531900-01	Rice	golgi	0.79	0.43

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.44	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF139	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5B01G319800	EnsemblPlants:TraesCS5B01G319800.1	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr5B:-:504832354..504833609

Molecular Weight (calculated)

42439.0 Da

IEP (calculated)

9.257

GRAVY (calculated)

-0.347

Length

379 amino acids

Sequence
(BLAST)

001: MDLAQLHAFW CAVSMSGSRD PSRRGSKNKN RSVEFPWEMY TLKELLQATN NFNESNKLGE GGFGTVYWGR TSKGVEIAVK RLKAMTAKAE MEFAIEVEIL
101: GRVRHKNLLS LRGFYAGGDE RLIVYDYMPN HSLLTHLHPH RGTPASQQHP PLDWPRRLAI ALGAAQGLAY LHHEASPHII HRDIKASNVL LDADLVPKVA
201: DFGFAKLIPE GVSHLTTRVK GTLGYLAPEY AMWGKVSESC DVYSFGVLLL ELVSARRPLE KLPGGVKREI VQWAGPLVER RKWDRLADPR LTGRFDALQL
301: RAVVETAMLC SQSNAEGRPT MAEVVEMLRF SGERRNREIV PVADAASQDT TVTMDREDDV TGSSEPLDRG RSWKLTTLR

Best Arabidopsis Sequence Match ( AT1G52540.1 )
(BLAST)

001: MQIFSCFCCG KGFDRQKKVK TEPSWRIFSL KELHAATNSF NYDNKLGEGR FGSVYWGQLW DGSQIAVKRL KAWSSREEID FAVEVEILAR IRHKNLLSVR
101: GYCAEGQERL IVYDYMPNLS LVSHLHGQHS SESLLDWTRR MNIAVSSAQA IAYLHHFATP RIVHGDVRAS NVLLDSEFEA RVTDFGYDKL MPDDGANKST
201: KGNNIGYLSP ECIESGKESD MGDVYSFGVL LLELVTGKRP TERVNLTTKR GITEWVLPLV YERKFGEIVD QRLNGKYVEE ELKRIVLVGL MCAQRESEKR
301: PTMSEVVEML MIESKEKMAQ LEANPLFNGN NDGEVIDESS EIISEVRDHQ

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LDB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.