Factsheet for Os01t0104000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 18260611

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G079200.2	Wheat	plasma membrane	80.9	81.49
TraesCS3B01G093800.2	Wheat	plasma membrane	80.36	80.94
TraesCS3A01G078700.1	Wheat	plasma membrane	80.72	80.87
Zm00001d040192_P001	Maize	plasma membrane	78.74	78.74
EES00463	Sorghum	plasma membrane	77.66	77.66
HORVU3Hr1G014230.1	Barley	cytosol, mitochondrion, plasma membrane	81.44	73.62
GSMUA_Achr10P...	Banana	plasma membrane	71.89	71.89
VIT_16s0013g02130.t01	Wine grape	plasma membrane	65.77	65.65
Solyc02g068370.2.1	Tomato	nucleus, plasma membrane	60.18	61.4
PGSC0003DMT400024351	Potato	plasma membrane	60.18	60.95
KRH37541	Soybean	plasma membrane	59.46	60.55
KRH12592	Soybean	plasma membrane	59.28	60.15
AT1G52310.1	Thale cress	plasma membrane	58.38	58.7
CDY47532	Canola	plasma membrane	58.02	58.65
CDY02544	Canola	plasma membrane	56.58	57.51
Bra014322.1-P	Field mustard	plasma membrane	56.94	57.35
Os02t0186500-01	Rice	cytosol, plasma membrane	20.0	29.44
Os09t0531701-00	Rice	cytosol	19.1	28.8
Os06t0166900-01	Rice	plasma membrane	18.92	28.61
Os06t0654600-00	Rice	cytosol	14.59	20.25
Os09t0531900-01	Rice	golgi	2.7	2.16

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.27	Gene3D:3.10.100.10	Gene3D:3.30.200.20	EntrezGene:4326291	ProteinID:BAD44832.1
ProteinID:BAF03675.1	ProteinID:BAS69952.1	InterPro:C-type_lectin-like	InterPro:C-type_lectin-like/link_sf	InterPro:CTDL_fold	ProteinID:EAZ10201.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004713
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0018108	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001304
InterPro:IPR016186	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os01g0104000	EnsemblPlants:Os01t0104000-01	PFAM:PF00059	PFAM:PF07714
ScanProsite:PS00109	PFscan:PS50011	PFscan:PS50041	PFscan:PS51257	PANTHER:PTHR27006	PANTHER:PTHR27006:SF5
InterPro:Prot_kinase_dom	UniProt:Q658C8	SMART:SM00034	SMART:SM00219	SUPFAM:SSF56112	SUPFAM:SSF56436
InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom	UniParc:UPI000043A0DA
RefSeq:XP_015617545.1	SEG:seg	:	:	:	:

Description

C-type lectin domain containing protein. (Os01t0104000-01);Similar to predicted protein. (Os01t0104000-02)

Coordinates

chr1:-:206134..209606

Molecular Weight (calculated)

61943.4 Da

IEP (calculated)

8.700

GRAVY (calculated)

-0.076

Length

555 amino acids

Sequence
(BLAST)

001: MAAAILRFFF FFFFFILPAS LTATASTSTS SCPDGWQITP ALDKCFIYIP TPLSWDRSEA LCRNNFTAHL AALSSLQDLN LAKSLCGPSP SGCWVGGHRN
101: NTASAFAWKW SDDSSSWNDT AFPADPLRAN CSTTGCALAT TNDACTLVTN THAALTAKRC SDSHGLICMI NHEDRCYHDH CHKEYFIVLV VVSGFILLTT
201: LAVVVWLLVY RRSKRRRRSR EGSSTSATAL VPPLWKVFTS EELRSITKNF SEGNRLPGNA KTGGTYSGIL PDGSRVAIKR LKRSSLQRKK DFYSEIGRVA
301: KLYHPNLVAV KGCCYDHGDR FIVYEFVANG PLDVWLHHVP RGGRCLDWPM RMRVATTLAQ GIAFLHDKVK PQVVHRDIRA SNVLLDEEFG SHLMGVGLSK
401: FVPWEVMHER TVKAATYGYL APEFIYRNEL TTKSDVYSFG VLLLEIISGR RPTQSVESVG WQTIFEWATP LVQSHRYLEL LDPLIQELPD VGVIQKVVDL
501: VYACTQHVPS VRPRMSHVVH QLQQLELKSA ASEQLSGTST SATSPMLPLE VRTPR

Best Arabidopsis Sequence Match ( AT1G52310.1 )
(BLAST)

001: MELKWVSCRK QSLFLISCLA LLCLASLDTI SCESTQNATD FKKRSQTVSC PPDWIIGPNQ TKCYAYFKNS TSWEKSEMFC RTYGGHLASL ASSKELSFVQ
101: KLCNGNVSSC WIGGRSMNSS TSGFRWSWSD PKTPQWNQSM FPKVPIRTRC GNGNGSSSCR ANICIAVTNG SSSIFGERCN ASHAFVCAVD SDIKCRNCHK
201: YLVILAVVSG LILFTTFAII LWLLVYKRSK KRRKSRKVSN PASSSSVVPP SWKIFTSEEL RSMTKNFSEA NRLAGDAKTG GTYSGGLSDG TKVAVKRLKR
301: SSFQRKKEFY SEIRRAAKLY HPNVVAIKGC CYDHGERFIV YEFIASGPLD RWLHHVPRGG RSLDWNMRLN IATTLAQGIA FLHDKVKPQV VHRDIRASNV
401: LLDEEFGAHL MGVGLSKFVP WEVMQERTVM AGGTYGYLAP EYVYRNELTT KSDVYSFGVL LLEIVSGRRP TQAVNSSVGW QSIFEWATPL VQANRWLEIL
501: DPVITCGLPE ACVVQKVVDL VYSCTQNVPS MRPRMSHVVH QLQQLVQPLE VK

Arabidopsis Description

C-type lectin receptor-like tyrosine-protein kinase At1g52310 [Source:UniProtKB/Swiss-Prot;Acc:Q9C823]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.