Factsheet for Zm00001d040192_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00463	Sorghum	plasma membrane	90.27	90.27
TraesCS3D01G079200.2	Wheat	plasma membrane	81.26	81.85
TraesCS3B01G093800.2	Wheat	plasma membrane	80.9	81.49
TraesCS3A01G078700.1	Wheat	plasma membrane	79.64	79.78
Os01t0104000-01	Rice	plasma membrane	78.74	78.74
HORVU3Hr1G014230.1	Barley	cytosol, mitochondrion, plasma membrane	80.54	72.8
GSMUA_Achr10P...	Banana	plasma membrane	70.99	70.99
VIT_16s0013g02130.t01	Wine grape	plasma membrane	63.78	63.67
PGSC0003DMT400024351	Potato	plasma membrane	59.46	60.22
Solyc02g068370.2.1	Tomato	nucleus, plasma membrane	58.92	60.11
KRH37541	Soybean	plasma membrane	58.74	59.82
KRH12592	Soybean	plasma membrane	58.74	59.6
AT1G52310.1	Thale cress	plasma membrane	58.2	58.51
CDY47532	Canola	plasma membrane	57.48	58.11
Bra014322.1-P	Field mustard	plasma membrane	56.76	57.17
CDY02544	Canola	plasma membrane	56.22	57.14
Zm00001d053725_P002	Maize	nucleus	19.64	28.91
Zm00001d036300_P001	Maize	mitochondrion, nucleus, plastid	17.3	27.67
Zm00001d045202_P002	Maize	mitochondrion	17.84	26.4
Zm00001d015581_P001	Maize	cytosol	17.84	26.26
Zm00001d021286_P001	Maize	plastid	18.2	25.63
Zm00001d046926_P001	Maize	cytosol, plastid	19.28	25.06

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100384527	MapMan:18.4.1.27	Gene3D:3.10.100.10	Gene3D:3.30.200.20	UniProt:A0A096QLV7
InterPro:C-type_lectin-like	InterPro:C-type_lectin-like/link_sf	InterPro:CTDL_fold	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004713	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018108	GO:GO:0019538	GO:GO:0030246
InterPro:IPR000719	InterPro:IPR001304	InterPro:IPR016186	InterPro:Kinase-like_dom_sf	ProteinID:ONM30753.1	PFAM:PF00059
PFAM:PF07714	ScanProsite:PS00109	PFscan:PS50011	PFscan:PS50041	PANTHER:PTHR27006	PANTHER:PTHR27006:SF5
InterPro:Prot_kinase_dom	SMART:SM00034	SMART:SM00219	SUPFAM:SSF56112	SUPFAM:SSF56436	InterPro:Ser-Thr/Tyr_kinase_cat_dom
SignalP:SignalP-noTM	TMHMM:TMhelix	InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom	UniParc:UPI000221332C	EnsemblPlantsGene:Zm00001d040192
EnsemblPlants:Zm00001d040192_P001	EnsemblPlants:Zm00001d040192_T001	SEG:seg	:	:	:

Description

C-type lectin receptor-like tyrosine-protein kinase

Coordinates

chr3:+:31627408..31630769

Molecular Weight (calculated)

61524.6 Da

IEP (calculated)

8.841

GRAVY (calculated)

-0.150

Length

555 amino acids

Sequence
(BLAST)

001: MAAPALAFPM LLAASLLSVA APALARSPSC PDGWQGGPVQ NRCFMYISAS LSWDRSEAVC HNYSGHLAAV SSVQELNFVK SLCGSSSTGC WVGGHHYSTS
101: TGNGWKWSDD SSVWNETVFL GEPLPANCSD PACKVATSND FCTLVTNGQP STITEKRCSE SHGLICRMNH VDRCYHDHCH KEYFISIIAV SGFILATTLA
201: VVVWLLVYRR SKKRRRSREV LSASAAALVA PQWKVFTSEE LRSITKNFSE GNRLPGNAKT GGTYSGILPD GSKVAIKRLK RSSLQRKKDF YSEIRRVAKL
301: YHPNLVAVKG CCYDHGDRFI VYEFVANGPL DVWLHHIPRG GRSLDWAMRM RAATTLAQGI AFLHDKVKPQ VVHRDIRASN VLLDEDFGSH LMGVGLSKFV
401: PWEVMHERTV KAASYGYLAP EFIYRNELTT KSDVYSFGVL LLEIISGRRP AQSVESVGWQ TIFEWATPLV QSHRYLDLLD PLIQESPDAG VVQKVVDLVY
501: SCTQHVPSVR PRMSHVVHQL QQLELKSAAS EQQLRSGTST SATSPMLPLE VRTPR

Best Arabidopsis Sequence Match ( AT1G52310.1 )
(BLAST)

001: MELKWVSCRK QSLFLISCLA LLCLASLDTI SCESTQNATD FKKRSQTVSC PPDWIIGPNQ TKCYAYFKNS TSWEKSEMFC RTYGGHLASL ASSKELSFVQ
101: KLCNGNVSSC WIGGRSMNSS TSGFRWSWSD PKTPQWNQSM FPKVPIRTRC GNGNGSSSCR ANICIAVTNG SSSIFGERCN ASHAFVCAVD SDIKCRNCHK
201: YLVILAVVSG LILFTTFAII LWLLVYKRSK KRRKSRKVSN PASSSSVVPP SWKIFTSEEL RSMTKNFSEA NRLAGDAKTG GTYSGGLSDG TKVAVKRLKR
301: SSFQRKKEFY SEIRRAAKLY HPNVVAIKGC CYDHGERFIV YEFIASGPLD RWLHHVPRGG RSLDWNMRLN IATTLAQGIA FLHDKVKPQV VHRDIRASNV
401: LLDEEFGAHL MGVGLSKFVP WEVMQERTVM AGGTYGYLAP EYVYRNELTT KSDVYSFGVL LLEIVSGRRP TQAVNSSVGW QSIFEWATPL VQANRWLEIL
501: DPVITCGLPE ACVVQKVVDL VYSCTQNVPS MRPRMSHVVH QLQQLVQPLE VK

Arabidopsis Description

C-type lectin receptor-like tyrosine-protein kinase At1g52310 [Source:UniProtKB/Swiss-Prot;Acc:Q9C823]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.