Factsheet for GSMUA_Achr10P28980_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G093800.2	Wheat	plasma membrane	74.05	74.59
TraesCS3D01G079200.2	Wheat	plasma membrane	73.51	74.05
TraesCS3A01G078700.1	Wheat	plasma membrane	73.69	73.83
Os01t0104000-01	Rice	plasma membrane	71.89	71.89
Zm00001d040192_P001	Maize	plasma membrane	70.99	70.99
EES00463	Sorghum	plasma membrane	69.73	69.73
VIT_16s0013g02130.t01	Wine grape	plasma membrane	69.37	69.24
HORVU3Hr1G014230.1	Barley	cytosol, mitochondrion, plasma membrane	73.69	66.61
Solyc02g068370.2.1	Tomato	nucleus, plasma membrane	63.96	65.26
PGSC0003DMT400024351	Potato	plasma membrane	63.78	64.6
KRH37541	Soybean	plasma membrane	63.06	64.22
KRH12592	Soybean	plasma membrane	63.06	63.99
AT1G52310.1	Thale cress	plasma membrane	60.72	61.05
CDY47532	Canola	plasma membrane	59.82	60.47
CDY02544	Canola	plasma membrane	59.28	60.26
Bra014322.1-P	Field mustard	plasma membrane	59.64	60.07
GSMUA_Achr4P20290_001	Banana	cytosol	20.0	34.58
GSMUA_Achr9P22520_001	Banana	mitochondrion	18.92	30.26
GSMUA_Achr8P18500_001	Banana	mitochondrion	18.92	29.66
GSMUA_Achr6P35110_001	Banana	cytosol	18.56	28.22
GSMUA_Achr2P04980_001	Banana	cytosol	18.92	27.85
GSMUA_AchrUn_...	Banana	cytosol	16.04	27.05
GSMUA_Achr7P05710_001	Banana	mitochondrion	19.46	24.88

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.27	Gene3D:3.10.100.10	Gene3D:3.30.200.20	InterPro:C-type_lectin-like	InterPro:C-type_lectin-like/link_sf
InterPro:CTDL_fold	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004713
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0018108	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G28980_001	EnsemblPlants:GSMUA_Achr10P28980_001	EnsemblPlants:GSMUA_Achr10T28980_001	InterPro:IPR000719
InterPro:IPR001304	InterPro:IPR016186	InterPro:Kinase-like_dom_sf	UniProt:M0RMC2	PFAM:PF00059	PFAM:PF07714
ScanProsite:PS00109	PFscan:PS50011	PFscan:PS50041	PANTHER:PTHR27006	PANTHER:PTHR27006:SF5	InterPro:Prot_kinase_dom
SMART:SM00034	SMART:SM00219	SUPFAM:SSF56112	SUPFAM:SSF56436	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM
TMHMM:TMhelix	InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom	UniParc:UPI000296C5EC	SEG:seg	:

Description

TKL_IRAK_C-LEC.1 - TKL_IRAK_C-LEC has homology to C-type lectin receptors, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G28980_001]

Coordinates

chr10:+:31627663..31633225

Molecular Weight (calculated)

61584.2 Da

IEP (calculated)

9.282

GRAVY (calculated)

-0.106

Length

555 amino acids

Sequence
(BLAST)

001: MARGGGVFRS SCLICIFLAA SICCISAQDS AFCPSGWYVG PNKNKCFIHI ASSLSWIKSE KLCQSHNGHL AALTSAQELS LAQSLCAGSS TGCWVGGRGY
101: NSTLGFGWKW SDNTSSWNES VFPGEPFHVN CTGASCNSIS PTDSCTLVTS GHVAFVGERC NTSHELICML GRESKCSHKH CHREYFIILA AVSGLILFIT
201: LALVIWLLVY RRSKKRRRSR KISSPSAAAL VPPSWKVFTS EELRSITKNF SEGNRLIGDA KTGGTYSGFL SDGSRVAVKR LKRYSLQRKK EFYSEVGRVA
301: KLHHPNLVAV KGCCYDHGDR YIVYKFVANG PLDRWLHHIP RGGRNLDWAM RIRVATTLAQ GIAFLHDKVK PQVVHRDIRA SNVLLDEEFG SHLMGVGLSK
401: FVPWEVMHER TKMAGTYGYL APEFMYRNEL TTKSDVYSFG VLLLEIISGR RPGQAVESVG WQTIFEWATP LVQSHRYVEL LDPLISDIPD DGVIQKVVDL
501: VYACTQHVPS VRPRMSHVVH QLQQLGLRAV SEQPRSGTST SATSPMLPLQ VETPR

Best Arabidopsis Sequence Match ( AT1G52310.1 )
(BLAST)

001: MELKWVSCRK QSLFLISCLA LLCLASLDTI SCESTQNATD FKKRSQTVSC PPDWIIGPNQ TKCYAYFKNS TSWEKSEMFC RTYGGHLASL ASSKELSFVQ
101: KLCNGNVSSC WIGGRSMNSS TSGFRWSWSD PKTPQWNQSM FPKVPIRTRC GNGNGSSSCR ANICIAVTNG SSSIFGERCN ASHAFVCAVD SDIKCRNCHK
201: YLVILAVVSG LILFTTFAII LWLLVYKRSK KRRKSRKVSN PASSSSVVPP SWKIFTSEEL RSMTKNFSEA NRLAGDAKTG GTYSGGLSDG TKVAVKRLKR
301: SSFQRKKEFY SEIRRAAKLY HPNVVAIKGC CYDHGERFIV YEFIASGPLD RWLHHVPRGG RSLDWNMRLN IATTLAQGIA FLHDKVKPQV VHRDIRASNV
401: LLDEEFGAHL MGVGLSKFVP WEVMQERTVM AGGTYGYLAP EYVYRNELTT KSDVYSFGVL LLEIVSGRRP TQAVNSSVGW QSIFEWATPL VQANRWLEIL
501: DPVITCGLPE ACVVQKVVDL VYSCTQNVPS MRPRMSHVVH QLQQLVQPLE VK

Arabidopsis Description

C-type lectin receptor-like tyrosine-protein kinase At1g52310 [Source:UniProtKB/Swiss-Prot;Acc:Q9C823]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.