Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G471700.1 | Wheat | cytosol | 92.06 | 94.71 |
| TraesCS2A01G471700.1 | Wheat | cytosol | 92.06 | 94.03 |
| TraesCSU01G034400.1 | Wheat | cytosol | 42.76 | 50.83 |
| OQU82373 | Sorghum | cytosol, plastid | 36.68 | 46.31 |
| OQU82372 | Sorghum | plastid | 36.22 | 45.45 |
| Os04t0625500-00 | Rice | plastid | 37.85 | 43.2 |
| EES11459 | Sorghum | plastid | 35.05 | 39.37 |
| Os04t0625400-00 | Rice | plastid | 29.91 | 38.79 |
| TraesCSU01G239300.1 | Wheat | cytosol | 24.3 | 29.05 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | InterPro:BPM_C | InterPro:BTB/POZ_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 |
| InterPro:MATH/TRAF_dom | PFAM:PF00651 | PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF224 |
| InterPro:SKP1/BTB/POZ_sf | SMART:SM00061 | SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | TMHMM:TMhelix |
| InterPro:TRAF-like | EnsemblPlantsGene:TraesCSU01G020200 | EnsemblPlants:TraesCSU01G020200.1 | TIGR:cd00121 | TIGR:cd14736 | : |
Description
No Description!
Coordinates
chrUn:-:22230036..22232479
Molecular Weight (calculated)
47379.1 Da
IEP (calculated)
7.131
GRAVY (calculated)
-0.097
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNTIGSSSS PVKQDVPETW STSFTEGDTA AHNFEVTGFS LLDGMGAGNF ISSSTFCVGG CEWDITFYPD GLKEDGGAHA SAYLRLCNGE LGLQTNYTLS
101: LLGKDGQVLV HGSIEHTFQS AGIFWGFEHF VQKSKLRRLL SDNEDCVTIR CVLTVMRKHD TLTIPAPPSN LQEDFARMLK DEEGVDVTFI VGDKSFRAHR
201: HVLAARSPAF RAELLDPTKE DPTKPVKVDD MDPVIFEALL YFMYTDTLPH GCDLEKNATL QHLFVVGVRY GLDRLATMCE GKLCQNINEQ TVATTLTLAE
301: WYDRALLRNA CIAFVSSQDV LDAMKETNGF KHLMTRYPGV MVDILKQNLP SSIGVRKQVV RMQRGRTPIS RNMKRRASRV RHAVLPSVCV LALACGFALG
401: LRPGAGLGWL LFPHPQRLLT SQPMLGFL
101: LLGKDGQVLV HGSIEHTFQS AGIFWGFEHF VQKSKLRRLL SDNEDCVTIR CVLTVMRKHD TLTIPAPPSN LQEDFARMLK DEEGVDVTFI VGDKSFRAHR
201: HVLAARSPAF RAELLDPTKE DPTKPVKVDD MDPVIFEALL YFMYTDTLPH GCDLEKNATL QHLFVVGVRY GLDRLATMCE GKLCQNINEQ TVATTLTLAE
301: WYDRALLRNA CIAFVSSQDV LDAMKETNGF KHLMTRYPGV MVDILKQNLP SSIGVRKQVV RMQRGRTPIS RNMKRRASRV RHAVLPSVCV LALACGFALG
401: LRPGAGLGWL LFPHPQRLLT SQPMLGFL
001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
Arabidopsis Description
BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.