Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G359600.1 | Wheat | cytosol | 95.28 | 95.28 |
| TraesCS2D01G339900.1 | Wheat | cytosol | 93.51 | 93.51 |
| TraesCS2A01G323200.1 | Wheat | cytosol | 84.37 | 82.66 |
| Zm00001d025707_P001 | Maize | cytosol | 74.34 | 73.9 |
| EES11006 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 75.52 | 70.72 |
| Os04t0482300-01 | Rice | cytosol | 73.75 | 70.42 |
| GSMUA_Achr9P02050_001 | Banana | cytosol | 53.1 | 52.79 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 54.87 | 52.69 |
| GSMUA_Achr6P12110_001 | Banana | nucleus | 51.33 | 50.29 |
| PGSC0003DMT400069397 | Potato | nucleus | 43.36 | 44.14 |
| TraesCS3A01G413600.1 | Wheat | cytosol, plastid | 43.66 | 42.53 |
| KRH03892 | Soybean | cytosol | 43.36 | 42.49 |
| TraesCS3A01G413700.1 | Wheat | cytosol, plastid | 43.66 | 42.17 |
| Solyc06g071820.2.1 | Tomato | nucleus | 42.77 | 41.55 |
| PGSC0003DMT400039384 | Potato | nucleus | 42.18 | 41.45 |
| Solyc03g111710.2.1 | Tomato | nucleus | 42.18 | 41.45 |
| KRH37914 | Soybean | cytosol | 12.09 | 41.0 |
| VIT_17s0000g09790.t01 | Wine grape | cytosol | 41.59 | 40.63 |
| KRH57174 | Soybean | cytosol | 26.25 | 40.27 |
| KRH63672 | Soybean | nucleus | 38.64 | 40.06 |
| PGSC0003DMT400069392 | Potato | nucleus | 40.71 | 39.54 |
| Solyc06g071830.2.1 | Tomato | nucleus | 38.64 | 39.34 |
| CDY41504 | Canola | nucleus | 38.35 | 39.16 |
| AT3G48360.1 | Thale cress | nucleus | 41.59 | 38.74 |
| Bra038612.1-P | Field mustard | nucleus | 41.3 | 38.57 |
| AT5G63160.1 | Thale cress | nucleus | 41.3 | 38.36 |
| Bra029235.1-P | Field mustard | nucleus | 41.0 | 37.77 |
| CDX84392 | Canola | nucleus | 40.12 | 37.57 |
| CDY48173 | Canola | nucleus | 40.12 | 37.47 |
| CDY70710 | Canola | nucleus | 17.11 | 36.94 |
| Bra018065.1-P | Field mustard | nucleus | 40.41 | 36.24 |
| CDY45741 | Canola | nucleus | 41.0 | 35.01 |
| CDY30743 | Canola | nucleus | 41.0 | 35.01 |
| CDY39576 | Canola | nucleus | 37.76 | 34.88 |
| TraesCS3A01G400400.1 | Wheat | cytosol | 35.1 | 30.05 |
Protein Annotations
| Gene3D:1.20.1020.10 | Gene3D:1.25.40.420 | MapMan:15.5.31 | MapMan:19.2.2.8.2.2.4 | Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom |
| GO:GO:0003674 | GO:GO:0003712 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000197 | InterPro:IPR000210 | InterPro:IPR035898 |
| PFAM:PF00651 | PFAM:PF02135 | PFscan:PS50097 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF211 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00225 | SMART:SM00551 | SUPFAM:SSF54695 | SUPFAM:SSF57933 | InterPro:TAZ_dom_sf | EnsemblPlantsGene:TraesCS2A01G323000 |
| EnsemblPlants:TraesCS2A01G323000.1 | InterPro:Znf_TAZ | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:-:552838453..552840023
Molecular Weight (calculated)
37665.8 Da
IEP (calculated)
9.794
GRAVY (calculated)
-0.125
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLCADFDAL RASAADVRIV TSDGQSIAAH SCVLASASPV LERMIDRARR GWGAHCTIRV LGVSFDAVRA FLHFLYSAKV APEEEELVGA HGTQLLALAH
101: AYRVGWLKRA AEAAVSARLT PERAVDMLKL ARLCDARRLY LRCARLAAKD FSAVERSDGW RFARRHDIAL QLELLQLLED ADQRKERWAR ERAAQEACRQ
201: LGEAMASLEH IFPGDGAVCA DAPCAEAGCT CRGLQLLMRH FATCQKKVAP GGCARCKRML QLFRLHASVC DRPDQACRVP LCSHFKAKAQ TEKADKTWRL
301: LVRKVTRAKV MSSLATRKVV PEVVAESWTR YNGRVAKLR
101: AYRVGWLKRA AEAAVSARLT PERAVDMLKL ARLCDARRLY LRCARLAAKD FSAVERSDGW RFARRHDIAL QLELLQLLED ADQRKERWAR ERAAQEACRQ
201: LGEAMASLEH IFPGDGAVCA DAPCAEAGCT CRGLQLLMRH FATCQKKVAP GGCARCKRML QLFRLHASVC DRPDQACRVP LCSHFKAKAQ TEKADKTWRL
301: LVRKVTRAKV MSSLATRKVV PEVVAESWTR YNGRVAKLR
001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV
Arabidopsis Description
BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.