CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91803
KRG94435
KRG99095
KRH07021
KRH07022
KRH34983
KRH34984
KRH45896
KRH70713

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48360.1	KRG99095	AT1G26830.1	15772280
AT3G48360.1	KRH45896	AT1G26830.1	15772280
AT3G48360.1	KRH70713	AT1G26830.1	15772280
AT3G48360.1	KRG91803	AT1G35670.1	19130088
AT3G48360.1	KRH34983	AT1G35670.1	19130088
AT3G48360.1	KRH34984	AT1G35670.1	19130088
AT3G48360.1	KRG94435	AT3G01770.1	15316289
AT3G48360.1	KRH07021	AT3G01770.1	15316289
AT3G48360.1	KRH07022	AT3G01770.1	15316289
AT3G48360.1	KRG91803	AT4G09570.1	19130088
AT3G48360.1	KRH34983	AT4G09570.1	19130088
AT3G48360.1	KRH34984	AT4G09570.1	19130088
AT5G63160.1	KRG99095	AT1G26830.1	15772280
AT5G63160.1	KRH45896	AT1G26830.1	15772280
AT5G63160.1	KRH70713	AT1G26830.1	15772280
AT5G63160.1	KRG94435	AT3G01770.1	15316289
AT5G63160.1	KRH07021	AT3G01770.1	15316289
AT5G63160.1	KRH07022	AT3G01770.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70710	Canola	nucleus	49.0	31.21
KRH03892	Soybean	cytosol	77.0	22.25
HORVU3Hr1G092090.3	Barley	mitochondrion, nucleus	41.0	20.81
KRH63672	Soybean	nucleus	57.0	17.43
HORVU2Hr1G083430.3	Barley	nucleus	26.0	14.86
VIT_17s0000g09790.t01	Wine grape	cytosol	51.0	14.7
PGSC0003DMT400069397	Potato	nucleus	48.0	14.41
CDY41504	Canola	nucleus	47.0	14.16
Solyc06g071830.2.1	Tomato	nucleus	47.0	14.11
Bra038612.1-P	Field mustard	nucleus	50.0	13.77
Solyc06g071820.2.1	Tomato	nucleus	48.0	13.75
AT3G48360.1	Thale cress	nucleus	49.0	13.46
AT5G63160.1	Thale cress	nucleus	49.0	13.42
Solyc03g111710.2.1	Tomato	nucleus	46.0	13.33
PGSC0003DMT400039384	Potato	nucleus	46.0	13.33
CDX84392	Canola	nucleus	48.0	13.26
PGSC0003DMT400069392	Potato	nucleus	46.0	13.18
Bra029235.1-P	Field mustard	nucleus	48.0	13.04
GSMUA_Achr11P...	Banana	nucleus	46.0	12.96
CDY48173	Canola	nucleus	47.0	12.95
CDY39576	Canola	nucleus	47.0	12.81
GSMUA_AchrUn_...	Banana	nucleus	44.0	12.79
Bra018065.1-P	Field mustard	nucleus	47.0	12.43
TraesCS2B01G359400.1	Wheat	cytosol	43.0	12.43
CDY45741	Canola	nucleus	49.0	12.34
GSMUA_Achr9P02050_001	Banana	cytosol	42.0	12.32
Zm00001d042443_P001	Maize	cytosol	42.0	12.21
TraesCS2B01G359600.1	Wheat	cytosol	41.0	12.09
TraesCS2A01G323000.1	Wheat	cytosol	41.0	12.09
CDY30743	Canola	nucleus	48.0	12.09
EES01931	Sorghum	cytosol	42.0	12.03
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	42.0	11.9
TraesCS2A01G323200.1	Wheat	cytosol	41.0	11.85
TraesCS3A01G413700.1	Wheat	cytosol, plastid	41.0	11.68
Os01t0908200-01	Rice	cytosol	40.0	11.53
TraesCS2D01G339900.1	Wheat	cytosol	39.0	11.5
TraesCS3A01G413600.1	Wheat	cytosol, plastid	40.0	11.49
TraesCS3D01G408100.1	Wheat	cytosol, plastid	40.0	11.46
TraesCS3D01G408000.1	Wheat	plastid	40.0	11.33
TraesCS3B01G448000.1	Wheat	cytosol, plastid	39.0	11.27
GSMUA_Achr6P12110_001	Banana	nucleus	39.0	11.27
Zm00001d025707_P001	Maize	cytosol	38.0	11.14
TraesCS2D01G339700.1	Wheat	cytosol	42.0	11.08
Os04t0482300-01	Rice	cytosol	39.0	10.99
TraesCS3B01G448100.1	Wheat	plastid	38.0	10.8
KRH77116	Soybean	plastid	40.0	10.55
EES11006	Sorghum	cytosol, endoplasmic reticulum, nucleus	37.0	10.22
GSMUA_Achr6P12420_001	Banana	nucleus	37.0	9.95
EES05370	Sorghum	plastid	29.0	8.15
Zm00001d017101_P001	Maize	plastid	30.0	8.13
KRH57174	Soybean	cytosol	15.0	6.79
HORVU2Hr1G083490.1	Barley	extracellular	4.0	4.6
Os02t0596700-00	Rice	plastid	10.0	3.36
HORVU2Hr1G083410.1	Barley	cytosol	1.0	1.25

Protein Annotations

Gene3D:1.20.1020.10	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	EMBL:ACUP02005560	EnsemblPlantsGene:GLYMA_09G098400	GO:GO:0003674
GO:GO:0003712	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016573
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000197	InterPro:IPR035898	UniProt:K7LCV2	EnsemblPlants:KRH37914
ProteinID:KRH37914	ProteinID:KRH37914.1	PFAM:PF02135	PANTHER:PTHR24413	PANTHER:PTHR24413:SF75	SMART:SM00551
SUPFAM:SSF57933	InterPro:TAZ_dom_sf	UniParc:UPI000295492E	InterPro:Znf_TAZ	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:17244955..17265255

Molecular Weight (calculated)

11427.2 Da

IEP (calculated)

8.429

GRAVY (calculated)

-0.019

Length

100 amino acids

Sequence
(BLAST)

1: MECLEHICYD GCTHVEPYDA AEVKRERTPC GRIATCQALQ VLIRHFATCE KKVRGGCVRC KRMLQLFRLH SYLCHHTDSS CKVPFLPGLL RLLLLHGTIS

Best Arabidopsis Sequence Match ( AT5G63160.2 )
(BLAST)

001: MAITATQNDG VSLNANKISY DLVETDVEII TSGRRSIPAH SGILASVSPV LTNIIEKPRK IHGGSSKKVI KILGVPCDAV SVFVRFLYSP SVTENEMEKY
101: GIHLLALSHV YMVTQLKQRC TKGVGERVTA ENVVDILQLA RLCDAPDLCL KCMRFIHYKF KTVEQTEGWK FLQEHDPFLE LDILQFIDDA ESRKKRRRRH
201: RREQNLYLQL SEAMECIEHI CTEGCTLVGP SSNLDNKSTC QAKPGPCSAF STCYGLQLLI RHFAVCKKRV DGKGCVRCKR MIQLLRLHSS ICDQSESCRV
301: PLCR

Arabidopsis Description

BT1BTB/POZ and TAZ domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMK7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.