Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G413600.1 | Wheat | cytosol, plastid | 90.26 | 90.52 |
| TraesCS3D01G408000.1 | Wheat | plastid | 91.12 | 90.08 |
| HORVU3Hr1G092090.3 | Barley | mitochondrion, nucleus | 50.72 | 89.85 |
| Os01t0908200-01 | Rice | cytosol | 69.63 | 70.03 |
| EES01931 | Sorghum | cytosol | 67.91 | 67.91 |
| Zm00001d042443_P001 | Maize | cytosol | 66.19 | 67.15 |
| GSMUA_Achr11P... | Banana | nucleus | 49.86 | 49.01 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.85 | 46.51 |
| KRH57174 | Soybean | cytosol | 29.23 | 46.15 |
| PGSC0003DMT400069397 | Potato | nucleus | 43.27 | 45.35 |
| VIT_17s0000g09790.t01 | Wine grape | cytosol | 44.41 | 44.67 |
| KRH63672 | Soybean | nucleus | 41.83 | 44.65 |
| KRH03892 | Soybean | cytosol | 43.84 | 44.22 |
| TraesCS2D01G339900.1 | Wheat | cytosol | 42.12 | 43.36 |
| PGSC0003DMT400039384 | Potato | nucleus | 42.69 | 43.19 |
| Solyc06g071820.2.1 | Tomato | nucleus | 42.98 | 42.98 |
| Solyc03g111710.2.1 | Tomato | nucleus | 42.41 | 42.9 |
| PGSC0003DMT400069392 | Potato | nucleus | 42.69 | 42.69 |
| CDY41504 | Canola | nucleus | 40.11 | 42.17 |
| Bra029235.1-P | Field mustard | nucleus | 43.84 | 41.58 |
| Solyc06g071830.2.1 | Tomato | nucleus | 39.26 | 41.14 |
| GSMUA_Achr6P12420_001 | Banana | nucleus | 43.27 | 40.59 |
| CDX84392 | Canola | nucleus | 41.55 | 40.06 |
| KRH37914 | Soybean | cytosol | 11.46 | 40.0 |
| Bra038612.1-P | Field mustard | nucleus | 41.55 | 39.94 |
| AT3G48360.1 | Thale cress | nucleus | 41.55 | 39.84 |
| AT5G63160.1 | Thale cress | nucleus | 41.55 | 39.73 |
| CDY30743 | Canola | nucleus | 44.13 | 38.79 |
| TraesCS2D01G339700.1 | Wheat | cytosol | 42.12 | 38.79 |
| CDY48173 | Canola | nucleus | 39.83 | 38.29 |
| CDY70710 | Canola | nucleus | 17.19 | 38.22 |
| CDY45741 | Canola | nucleus | 42.98 | 37.78 |
| CDY39576 | Canola | nucleus | 39.26 | 37.33 |
| Bra018065.1-P | Field mustard | nucleus | 39.83 | 36.77 |
Protein Annotations
| Gene3D:1.20.1020.10 | Gene3D:1.25.40.420 | MapMan:15.5.31 | MapMan:19.2.2.8.2.2.4 | Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom |
| GO:GO:0003674 | GO:GO:0003712 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000197 | InterPro:IPR000210 | InterPro:IPR035898 |
| PFAM:PF00651 | PFAM:PF02135 | PFscan:PS50097 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF75 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00225 | SMART:SM00551 | InterPro:SPOP_C | SUPFAM:SSF54695 | SUPFAM:SSF57933 | InterPro:TAZ_dom_sf |
| EnsemblPlantsGene:TraesCS3D01G408100 | EnsemblPlants:TraesCS3D01G408100.1 | InterPro:Znf_TAZ | TIGR:cd14734 | SEG:seg | : |
Description
No Description!
Coordinates
chr3D:-:522195565..522198934
Molecular Weight (calculated)
38759.0 Da
IEP (calculated)
10.090
GRAVY (calculated)
-0.341
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEAPARAAG GGGGASGPAD VDVVTSSGRR KIAAHSSVLA SASPVLETIL ERRLQRVRES GKGGRAVVRI RGVTDDVAAA FVRLLYAGSR RGDGEVEEEV
101: ERYAEQLLVL AHAYRVPWLK RWCQEAIGSR LTPGTVVDAL QLADLCDAPQ LHLRCMRLLA KEFRAVERTE AWRFLRDNDP WQELDVLRRL HDADMRRRKW
201: RRKRAEQKVY VELSDAMDIL RHICTEGCTE VGPVGQAPAK SPCPAYATCR GLQLLIRHFS RCKSRATCPR CQRMWQLLRL HAALCRVPDG HCNTPLCTQF
301: KLKEQQKEAM SASVAAKAGD GRWGLLVKKV KAVSVMSSLG KRSSPSQCC
101: ERYAEQLLVL AHAYRVPWLK RWCQEAIGSR LTPGTVVDAL QLADLCDAPQ LHLRCMRLLA KEFRAVERTE AWRFLRDNDP WQELDVLRRL HDADMRRRKW
201: RRKRAEQKVY VELSDAMDIL RHICTEGCTE VGPVGQAPAK SPCPAYATCR GLQLLIRHFS RCKSRATCPR CQRMWQLLRL HAALCRVPDG HCNTPLCTQF
301: KLKEQQKEAM SASVAAKAGD GRWGLLVKKV KAVSVMSSLG KRSSPSQCC
001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV
Arabidopsis Description
BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.