CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91803
KRG94435
KRG99095
KRH07021
KRH07022
KRH34983
KRH34984
KRH45896
KRH70713

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48360.1	KRG99095	AT1G26830.1	15772280
AT3G48360.1	KRH45896	AT1G26830.1	15772280
AT3G48360.1	KRH70713	AT1G26830.1	15772280
AT3G48360.1	KRG91803	AT1G35670.1	19130088
AT3G48360.1	KRH34983	AT1G35670.1	19130088
AT3G48360.1	KRH34984	AT1G35670.1	19130088
AT3G48360.1	KRG94435	AT3G01770.1	15316289
AT3G48360.1	KRH07021	AT3G01770.1	15316289
AT3G48360.1	KRH07022	AT3G01770.1	15316289
AT3G48360.1	KRG91803	AT4G09570.1	19130088
AT3G48360.1	KRH34983	AT4G09570.1	19130088
AT3G48360.1	KRH34984	AT4G09570.1	19130088
AT5G63160.1	KRG99095	AT1G26830.1	15772280
AT5G63160.1	KRH45896	AT1G26830.1	15772280
AT5G63160.1	KRH70713	AT1G26830.1	15772280
AT5G63160.1	KRG94435	AT3G01770.1	15316289
AT5G63160.1	KRH07021	AT3G01770.1	15316289
AT5G63160.1	KRH07022	AT3G01770.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57174	Soybean	cytosol	45.57	67.42
KRH03892	Soybean	cytosol	65.75	62.14
PGSC0003DMT400069397	Potato	nucleus	59.63	58.56
VIT_17s0000g09790.t01	Wine grape	cytosol	61.16	57.64
KRH37914	Soybean	cytosol	17.43	57.0
Solyc06g071820.2.1	Tomato	nucleus	60.24	56.45
PGSC0003DMT400039384	Potato	nucleus	58.1	55.07
Solyc03g111710.2.1	Tomato	nucleus	57.8	54.78
Solyc06g071830.2.1	Tomato	nucleus	54.13	53.15
PGSC0003DMT400069392	Potato	nucleus	55.96	52.44
Bra029235.1-P	Field mustard	nucleus	57.8	51.36
CDY41504	Canola	nucleus	51.68	50.9
AT5G63160.1	Thale cress	nucleus	56.27	50.41
Bra038612.1-P	Field mustard	nucleus	55.66	50.14
CDX84392	Canola	nucleus	54.43	49.17
AT3G48360.1	Thale cress	nucleus	54.43	48.9
CDY70710	Canola	nucleus	23.24	48.41
CDY48173	Canola	nucleus	53.52	48.21
CDY30743	Canola	nucleus	57.19	47.1
CDY45741	Canola	nucleus	57.19	47.1
Bra018065.1-P	Field mustard	nucleus	53.21	46.03
CDY39576	Canola	nucleus	51.38	45.78
GSMUA_AchrUn_...	Banana	nucleus	47.09	44.77
GSMUA_Achr11P...	Banana	nucleus	48.01	44.23
Os01t0908200-01	Rice	cytosol	46.79	44.09
GSMUA_Achr9P02050_001	Banana	cytosol	45.87	43.99
HORVU3Hr1G092090.3	Barley	mitochondrion, nucleus	26.3	43.65
Zm00001d042443_P001	Maize	cytosol	45.87	43.6
EES01931	Sorghum	cytosol	46.48	43.55
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	46.18	42.78
TraesCS3B01G448100.1	Wheat	plastid	45.26	42.05
TraesCS3D01G408100.1	Wheat	cytosol, plastid	44.65	41.83
TraesCS3D01G408000.1	Wheat	plastid	44.65	41.36
TraesCS3B01G448000.1	Wheat	cytosol, plastid	43.73	41.33
TraesCS3A01G413700.1	Wheat	cytosol, plastid	43.73	40.74
TraesCS3A01G413600.1	Wheat	cytosol, plastid	42.81	40.23
GSMUA_Achr6P12110_001	Banana	nucleus	41.28	39.02
TraesCS2B01G359600.1	Wheat	cytosol	40.06	38.64
TraesCS2D01G339900.1	Wheat	cytosol	40.06	38.64
TraesCS2A01G323000.1	Wheat	cytosol	40.06	38.64
Zm00001d025707_P001	Maize	cytosol	40.06	38.42
TraesCS2A01G323200.1	Wheat	cytosol	40.06	37.86
TraesCS2B01G359400.1	Wheat	cytosol	39.76	37.57
GSMUA_Achr6P12420_001	Banana	nucleus	41.59	36.56
Os04t0482300-01	Rice	cytosol	39.45	36.34
HORVU2Hr1G083410.1	Barley	cytosol	8.87	36.25
EES05370	Sorghum	plastid	38.53	35.39
EES11006	Sorghum	cytosol, endoplasmic reticulum, nucleus	38.53	34.81
TraesCS2D01G339700.1	Wheat	cytosol	40.06	34.56
Zm00001d017101_P001	Maize	plastid	37.61	33.33
KRH77116	Soybean	plastid	37.31	32.19
HORVU2Hr1G083430.3	Barley	nucleus	15.6	29.14
HORVU2Hr1G083490.1	Barley	extracellular	5.81	21.84
Os02t0596700-00	Rice	plastid	16.21	17.79

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	EntrezGene:100813611	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10
EMBL:ACUP02002705	InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_04G190900	GO:GO:0003674	GO:GO:0003712	GO:GO:0003824
GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0016573	GO:GO:0016740	GO:GO:0019005	GO:GO:0019538	GO:GO:0030162	GO:GO:0031625
GO:GO:0042787	GO:GO:0043161	InterPro:IPR000197	InterPro:IPR000210	InterPro:IPR035898	UniProt:K7KL24
EnsemblPlants:KRH63672	ProteinID:KRH63672	ProteinID:KRH63672.1	PFAM:PF00651	PFAM:PF02135	PFscan:PS50097
PANTHER:PTHR24413	PANTHER:PTHR24413:SF75	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00551	InterPro:SPOP_C
SUPFAM:SSF54695	SUPFAM:SSF57933	InterPro:TAZ_dom_sf	UniParc:UPI000233A986	InterPro:Znf_TAZ	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:46152058..46154947

Molecular Weight (calculated)

37300.8 Da

IEP (calculated)

9.151

GRAVY (calculated)

-0.258

Length

327 amino acids

Sequence
(BLAST)

001: MDSPAVSSIH FHNAHVLPEP DLFMHTPGGN RIPAHATILA SASPVLENVI ASNRVVKIHG VPDGAVTAFV AFLYSSRCTE EDMDKYGIHL LALSHVYSVP
101: QLKQRCIKGL AQRLSTENVV DVLQLSRLCD APDLYLKCVK LLRNRFKAVK ETEGWKFLES HDPWLELDVL RLMGELEKRK RRVRKWREEE RLYVQLSEAM
201: ECLEHICTEG CTEVGPYEVE VGRQKTPCSK FATCQGLQVL IRHLGTCNRK LKGGCLRCKR MWQLFRLHSS ICLCQNSCKV PLCRQIRLKM EQENMKDDAR
301: WKLLVRKVAS AKALSSLALP KRKLDQS

Best Arabidopsis Sequence Match ( AT3G48360.1 )
(BLAST)

001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV

Arabidopsis Description

BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.