Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G470500.1 | Wheat | cytosol | 23.98 | 73.42 |
| TraesCS3A01G105400.1 | Wheat | cytosol | 27.79 | 72.1 |
| Os01t0194300-01 | Rice | cytosol | 27.72 | 71.31 |
| EES00131 | Sorghum | cytosol | 26.65 | 68.44 |
| Zm00001d039469_P001 | Maize | cytosol | 26.45 | 67.92 |
| TraesCS7A01G021800.1 | Wheat | cytosol, plastid | 24.05 | 64.4 |
| GSMUA_Achr2P16670_001 | Banana | cytosol | 22.65 | 58.05 |
| GSMUA_Achr7P09190_001 | Banana | cytosol | 21.64 | 56.35 |
| GSMUA_Achr6P00950_001 | Banana | nucleus | 22.11 | 52.54 |
| Solyc07g040690.2.1 | Tomato | cytosol | 20.17 | 52.43 |
| VIT_11s0016g01990.t01 | Wine grape | cytosol | 20.11 | 51.54 |
| KRH37416 | Soybean | cytosol | 18.84 | 48.45 |
| Bra027690.1-P | Field mustard | cytosol, plastid | 15.7 | 41.23 |
| CDY34413 | Canola | cytosol | 15.63 | 41.12 |
| CDY25575 | Canola | cytosol | 15.63 | 41.05 |
| AT1G64280.1 | Thale cress | cytosol | 15.83 | 39.97 |
| CDY50004 | Canola | cytosol | 15.9 | 39.93 |
| AT4G26120.2 | Thale cress | cytosol, plastid | 15.3 | 38.1 |
| Bra013950.1-P | Field mustard | cytosol | 14.63 | 37.82 |
| CDX94371 | Canola | cytosol | 15.1 | 37.36 |
| Bra013952.1-P | Field mustard | cytosol | 15.03 | 37.19 |
| CDX89362 | Canola | cytosol | 14.9 | 36.86 |
| CDX94376 | Canola | cytosol | 14.63 | 36.14 |
| CDX89364 | Canola | cytosol | 14.63 | 36.02 |
| TraesCS4A01G294400.1 | Wheat | cytosol, plastid | 13.69 | 34.11 |
| TraesCS3A01G298800.1 | Wheat | plastid | 13.89 | 33.66 |
| Bra010439.1-P | Field mustard | cytosol | 15.7 | 24.43 |
| CDY14314 | Canola | nucleus | 13.43 | 23.87 |
| TraesCS3A01G489000.1 | Wheat | cytosol | 8.08 | 23.54 |
| TraesCS5A01G134700.2 | Wheat | cytosol | 7.28 | 22.11 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:11.8.2.2 | MapMan:26.8.3.1.1 | Gene3D:3.30.710.10 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 |
| InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | InterPro:BTB/POZ_dom | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0043531 | InterPro:IPR000210 | InterPro:IPR002110 | InterPro:IPR020683 |
| InterPro:IPR032675 | InterPro:IPR036770 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:NPR1/NIM1-like_C | InterPro:NPR_central_dom |
| InterPro:P-loop_NTPase | PFAM:PF00651 | PFAM:PF00931 | PFAM:PF11900 | PFAM:PF12313 | PFAM:PF12796 |
| PRINTS:PR00364 | PFscan:PS50088 | PFscan:PS50097 | PFscan:PS50297 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF7 |
| InterPro:SKP1/BTB/POZ_sf | SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | SUPFAM:SSF54695 |
| EnsemblPlantsGene:TraesCS7A01G022800 | EnsemblPlants:TraesCS7A01G022800.1 | TIGR:cd00204 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:8996265..9006899
Molecular Weight (calculated)
169460.0 Da
IEP (calculated)
6.699
GRAVY (calculated)
-0.153
Length
1497 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDLTEKDKEE PSRKRRETRK VLDPVRIAGK KRRNNDDRIL EEDYKNVLID NPTTATVSDP VIESSAENEV EQSGAQLPVL EDISRLFDGS VSSSLGAMRP
0101: LVEKLGILLA PSQEHYKRLP KRIKEGVHLL KDDVEVISSY LDELSELEDP PPVAICWMNE ARDLSYDMVD YIDSLLFVPP DRFIKKRLKW YKQIAFIAQV
0201: SEHGTKTSKI IHVNVPRLPS KPKIAETISE FRIYVQEAFE RHDRYKLQCC STLRRHRFLS AGSMLPMPYD EVAQIVIDGR MNEFICSLAA NDTAGQQQLK
0301: VVSVLGSGCL GKTTLANVLY ERIEMQFECR AFIRVSRKPD MKRLFSDLFS QLHKKQPLPA SCNELGISDN TSKHMQHKRY LIVIDDLWDA SVWDIIKYAF
0401: PNGNCGSRII ITTQIEDVAL TCCCDRPEHV FEMKPLDDAH SRMLFFNRLF EGSIIWKDDL SMQWVAEASI VTQKGKGQYQ DRLKKAAGIC FDELIDRRFI
0501: QPSYINYNNE VLSCTVHDVV RELIAHKSAE ENFIVVVDYN RKNIALSHKV RRLSLIFGDA KYAKTPENIT KSQVRSLRFF GLFDCMPCIR DFKVLRVLNL
0601: QLSGHCGLHD PIDLTGISEL FQLRYLKIAS DVCIKLPNHI RGLQCLETLD VMDATRVTAI PWDIIHLPHL FHLALPVDTN LLGTMTDSVV SLWSLCKLNY
0701: LQDLYLTISS TPCSGHPEKN MDSVGSLLEG HGSLKNIVVS HGPSVKDIVV PGASKVIISW DDLEPPPLLQ RFECSPHSCV IFSQIPKWLK ELGNLCILKM
0801: AVMELQMSSV DILRGLPALI DLSLYVQWAP GERIIFDKAA GFSVLKYFKL RCTSGIPWLK FEADAMPNLW KLTLGFNAIP RMDQHQLIRI EHMPDLKEIS
0901: VKFGGAAAHI EYAVRSVVSN HPRNPTINMQ LVNSSSYGDE STEQSLPINW APESCAADAV ADVEPLRRLS DNLATAFHSP DDFAFLADMC IAVPGAPDLH
1001: VHRYMLSVRS PFLRAFFARR ASVEGNRLEL WELLGEKVEV GYEALQLVLE YLYSARFHVL PRPACVCVDM DGCAHVSCHP VISFMAQVLF VTFTFQITEL
1101: TNYFQEPILS HVMPFFSTQR HLLDVLDDVE VGNLPLILSV ANLCNKSCMK LLDRCLEMVV RSNLEMITLE KALPPDVMKQ ITDARLSLGL VSPEDKGFPK
1201: KHARRILRAL DSSDVELVRM LLKEGQTNLD DAFALHYAVE HCNSKITTEL LDIAHANVNH RNPRGYTVLH IAARRRDPKI LVSLLTKGAR PSDLTFDGRK
1301: AIQIAKRLTK HRDYFGITEE GKPSPKDRLC IEVLEQAERW DPQVGEASVS LARVGDCEPG KLLYLENRVG LARIHFPVEA RVAMDIAQLD GTSEFILGSS
1401: ADPPPEIQQA TVDLNETSLI MNDEHLARMR ALSKTVELVR RFFPRCSNVL DKIMDDESKL ASLGKEASME KRRFHDVHDS LQKAFSEDKE SSCLTSL
0101: LVEKLGILLA PSQEHYKRLP KRIKEGVHLL KDDVEVISSY LDELSELEDP PPVAICWMNE ARDLSYDMVD YIDSLLFVPP DRFIKKRLKW YKQIAFIAQV
0201: SEHGTKTSKI IHVNVPRLPS KPKIAETISE FRIYVQEAFE RHDRYKLQCC STLRRHRFLS AGSMLPMPYD EVAQIVIDGR MNEFICSLAA NDTAGQQQLK
0301: VVSVLGSGCL GKTTLANVLY ERIEMQFECR AFIRVSRKPD MKRLFSDLFS QLHKKQPLPA SCNELGISDN TSKHMQHKRY LIVIDDLWDA SVWDIIKYAF
0401: PNGNCGSRII ITTQIEDVAL TCCCDRPEHV FEMKPLDDAH SRMLFFNRLF EGSIIWKDDL SMQWVAEASI VTQKGKGQYQ DRLKKAAGIC FDELIDRRFI
0501: QPSYINYNNE VLSCTVHDVV RELIAHKSAE ENFIVVVDYN RKNIALSHKV RRLSLIFGDA KYAKTPENIT KSQVRSLRFF GLFDCMPCIR DFKVLRVLNL
0601: QLSGHCGLHD PIDLTGISEL FQLRYLKIAS DVCIKLPNHI RGLQCLETLD VMDATRVTAI PWDIIHLPHL FHLALPVDTN LLGTMTDSVV SLWSLCKLNY
0701: LQDLYLTISS TPCSGHPEKN MDSVGSLLEG HGSLKNIVVS HGPSVKDIVV PGASKVIISW DDLEPPPLLQ RFECSPHSCV IFSQIPKWLK ELGNLCILKM
0801: AVMELQMSSV DILRGLPALI DLSLYVQWAP GERIIFDKAA GFSVLKYFKL RCTSGIPWLK FEADAMPNLW KLTLGFNAIP RMDQHQLIRI EHMPDLKEIS
0901: VKFGGAAAHI EYAVRSVVSN HPRNPTINMQ LVNSSSYGDE STEQSLPINW APESCAADAV ADVEPLRRLS DNLATAFHSP DDFAFLADMC IAVPGAPDLH
1001: VHRYMLSVRS PFLRAFFARR ASVEGNRLEL WELLGEKVEV GYEALQLVLE YLYSARFHVL PRPACVCVDM DGCAHVSCHP VISFMAQVLF VTFTFQITEL
1101: TNYFQEPILS HVMPFFSTQR HLLDVLDDVE VGNLPLILSV ANLCNKSCMK LLDRCLEMVV RSNLEMITLE KALPPDVMKQ ITDARLSLGL VSPEDKGFPK
1201: KHARRILRAL DSSDVELVRM LLKEGQTNLD DAFALHYAVE HCNSKITTEL LDIAHANVNH RNPRGYTVLH IAARRRDPKI LVSLLTKGAR PSDLTFDGRK
1301: AIQIAKRLTK HRDYFGITEE GKPSPKDRLC IEVLEQAERW DPQVGEASVS LARVGDCEPG KLLYLENRVG LARIHFPVEA RVAMDIAQLD GTSEFILGSS
1401: ADPPPEIQQA TVDLNETSLI MNDEHLARMR ALSKTVELVR RFFPRCSNVL DKIMDDESKL ASLGKEASME KRRFHDVHDS LQKAFSEDKE SSCLTSL
001: MDTTIDGFAD SYEISSTSFV ATDNTDSSIV YLAAEQVLTG PDVSALQLLS NSFESVFDSP DDFYSDAKLV LSDGREVSFH RCVLSARSSF FKSALAAAKK
101: EKDSNNTAAV KLELKEIAKD YEVGFDSVVT VLAYVYSSRV RPPPKGVSEC ADENCCHVAC RPAVDFMLEV LYLAFIFKIP ELITLYQRHL LDVVDKVVIE
201: DTLVILKLAN ICGKACMKLL DRCKEIIVKS NVDMVSLEKS LPEELVKEII DRRKELGLEV PKVKKHVSNV HKALDSDDIE LVKLLLKEDH TNLDDACALH
301: FAVAYCNVKT ATDLLKLDLA DVNHRNPRGY TVLHVAAMRK EPQLILSLLE KGASASEATL EGRTALMIAK QATMAVECNN IPEQCKHSLK GRLCVEILEQ
401: EDKREQIPRD VPPSFAVAAD ELKMTLLDLE NRVALAQRLF PTEAQAAMEI AEMKGTCEFI VTSLEPDRLT GTKRTSPGVK IAPFRILEEH QSRLKALSKT
501: VELGKRFFPR CSAVLDQIMN CEDLTQLACG EDDTAEKRLQ KKQRYMEIQE TLKKAFSEDN LELGNSSLTD STSSTSKSTG GKRSNRKLSH RRR
101: EKDSNNTAAV KLELKEIAKD YEVGFDSVVT VLAYVYSSRV RPPPKGVSEC ADENCCHVAC RPAVDFMLEV LYLAFIFKIP ELITLYQRHL LDVVDKVVIE
201: DTLVILKLAN ICGKACMKLL DRCKEIIVKS NVDMVSLEKS LPEELVKEII DRRKELGLEV PKVKKHVSNV HKALDSDDIE LVKLLLKEDH TNLDDACALH
301: FAVAYCNVKT ATDLLKLDLA DVNHRNPRGY TVLHVAAMRK EPQLILSLLE KGASASEATL EGRTALMIAK QATMAVECNN IPEQCKHSLK GRLCVEILEQ
401: EDKREQIPRD VPPSFAVAAD ELKMTLLDLE NRVALAQRLF PTEAQAAMEI AEMKGTCEFI VTSLEPDRLT GTKRTSPGVK IAPFRILEEH QSRLKALSKT
501: VELGKRFFPR CSAVLDQIMN CEDLTQLACG EDDTAEKRLQ KKQRYMEIQE TLKKAFSEDN LELGNSSLTD STSSTSKSTG GKRSNRKLSH RRR
Arabidopsis Description
NPR1Regulatory protein NPR1 [Source:UniProtKB/Swiss-Prot;Acc:P93002]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.