Factsheet for Bra010439.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14314	Canola	nucleus	79.94	91.33
Bra013950.1-P	Field mustard	cytosol	42.62	70.81
Bra027690.1-P	Field mustard	cytosol, plastid	37.94	64.04
Bra013952.1-P	Field mustard	cytosol	35.14	55.87
VIT_11s0016g01990.t01	Wine grape	cytosol	30.98	51.03
Solyc07g040690.2.1	Tomato	cytosol	30.25	50.52
GSMUA_Achr7P09190_001	Banana	cytosol	28.59	47.83
KRH37416	Soybean	cytosol	28.59	47.25
GSMUA_Achr2P16670_001	Banana	cytosol	28.07	46.23
Os01t0194300-01	Rice	cytosol	26.4	43.64
TraesCS3A01G105400.1	Wheat	cytosol	26.09	43.5
EES00131	Sorghum	cytosol	25.99	42.88
GSMUA_Achr6P00950_001	Banana	nucleus	28.07	42.86
TraesCS3B01G123800.1	Wheat	cytosol	25.57	42.63
Zm00001d039469_P001	Maize	cytosol	25.78	42.54
TraesCS4A01G470500.1	Wheat	cytosol	21.41	42.13
TraesCS7D01G019000.1	Wheat	cytosol, mitochondrion	21.31	42.09
TraesCS3D01G107500.1	Wheat	cytosol	25.26	41.9
GSMUA_AchrUn_...	Banana	cytosol	24.84	41.57
GSMUA_Achr8P05490_001	Banana	cytosol	25.05	41.48
HORVU3Hr1G019230.6	Barley	cytosol	25.57	41.14
GSMUA_Achr3P25880_001	Banana	cytosol	23.7	40.14
TraesCS7A01G021800.1	Wheat	cytosol, plastid	21.83	37.57
Bra021949.1-P	Field mustard	plastid	21.1	36.12
Bra025093.1-P	Field mustard	plastid	20.17	35.53
Bra013416.1-P	Field mustard	plastid	20.58	33.67
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	12.06	25.11
Bra014645.1-P	Field mustard	cytosol	7.38	24.4
Bra007306.1-P	Field mustard	cytosol	11.54	24.03
Bra016938.1-P	Field mustard	cytosol	11.23	22.18
Bra004617.1-P	Field mustard	cytosol	7.28	22.08
Bra004618.1-P	Field mustard	cytosol	4.16	21.98
TraesCS7A01G022800.1	Wheat	cytosol	24.43	15.7

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.2	MapMan:12.2.6	MapMan:26.8.3.1.1	Gene3D:3.30.1120.90	Gene3D:3.30.710.10
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra010439	EnsemblPlants:Bra010439.1
EnsemblPlants:Bra010439.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M4D1T9
InterPro:NAP-like_sf	InterPro:NAP_family	InterPro:NPR1/NIM1-like_C	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF00956
PFAM:PF11900	PFAM:PF12313	PFAM:PF13637	PFscan:PS50088	PFscan:PS50097	PFscan:PS50297
PANTHER:PTHR11875	PANTHER:PTHR11875:SF98	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248	SUPFAM:SSF143113
SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI0002545866	SEG:seg	:	:

Description

AT1G64280 (E=5e-190) NPR1, SAI1, NIM1, ATNPR1 | NPR1 (NONEXPRESSER OF PR GENES 1); protein binding / transcription activator

Coordinates

chrA08:-:14532648..14539053

Molecular Weight (calculated)

108492.0 Da

IEP (calculated)

4.320

GRAVY (calculated)

-0.468

Length

962 amino acids

Sequence
(BLAST)

001: MDTVDSYEIS NQSSTVLSAA AEPTDNTESS AVRPPELSPV DVSALQLLSI NLESLFDSPE AFYGDAKLIL ADDREVSFHR FIVAARSPFF KNALAAAAEK
101: DPQKSSTAGT KLDLKNIATD YEVGFDSVAA VMAYVYSGRV RPPPKGVSDC ADEDCRHVSC RPAVDFMVEV LYLAFVFQIP ELVTMYQRHL VDVVDKVIIE
201: DALVILKLAN ICGQACKKLF DKCTEIIVKS NVDTVTLNKS LPQQIVKQVI EIRKELGLEV PEPNKHVSNI HKALECEDLD LVDLLLKEGY TNLDEAYALH
301: FAVAYCAVET ATELLKREVA DVNRRNPRGY TVLHVAAMRK EPSLIAFLLT KGANASDMAL DGRTALLIAK QVTKAGEYNC ITEEGKDSPK GRICVEILEQ
401: PENLGPFPED ASSACLALAP DNELKIRLID FENRVQMARC LFPTEAQLAM ELAPMKGTSE FTVDSQELDG TGAKRSAPDQ YMVPFVFEEK HRSRLEALSK
501: TVEFGRRFFP RCSRLLDKIA DCETLNILAF VEKETPENRL EKRQKYMEIQ ESLLMAFNED NEERGKSSRS GSSSSTSKST KRVSLSIVGS VICIRAAAEG
601: LQESKILEEM FKAPCIQNLV KDQVKWFFGL PPSPSQEALK DEDRAGLMNA LKNKLAGHSS DVLENLTPQV RARVDALKDI QSQHDELEAK FREERAVLEA
701: KYEKLYQPLY AKRYEIVNGT TEIELTPEDT KMDEVDDKTA EEKGVPSFWL TALQNNEVTS EEVTEHDEEA LKYLKDIKWC KTEEPKGFKL EFLFDSNPFF
801: KNNVLTKSYH VIDEDELLIE KAIGTEIDWY PGKCLTQKIV EMKPKKVTTN AKPVTKMEDC ESFFNFFNPP EVPDEDEDID EDRAEELQYQ MELDYDIGST
901: IRNKIIPHAV SWFTGEAMEE QEFDLDDDED DDTDEDEDED EDEDEDDDDD EMEEDSKTKK KV

Best Arabidopsis Sequence Match ( AT1G64280.1 )
(BLAST)

001: MDTTIDGFAD SYEISSTSFV ATDNTDSSIV YLAAEQVLTG PDVSALQLLS NSFESVFDSP DDFYSDAKLV LSDGREVSFH RCVLSARSSF FKSALAAAKK
101: EKDSNNTAAV KLELKEIAKD YEVGFDSVVT VLAYVYSSRV RPPPKGVSEC ADENCCHVAC RPAVDFMLEV LYLAFIFKIP ELITLYQRHL LDVVDKVVIE
201: DTLVILKLAN ICGKACMKLL DRCKEIIVKS NVDMVSLEKS LPEELVKEII DRRKELGLEV PKVKKHVSNV HKALDSDDIE LVKLLLKEDH TNLDDACALH
301: FAVAYCNVKT ATDLLKLDLA DVNHRNPRGY TVLHVAAMRK EPQLILSLLE KGASASEATL EGRTALMIAK QATMAVECNN IPEQCKHSLK GRLCVEILEQ
401: EDKREQIPRD VPPSFAVAAD ELKMTLLDLE NRVALAQRLF PTEAQAAMEI AEMKGTCEFI VTSLEPDRLT GTKRTSPGVK IAPFRILEEH QSRLKALSKT
501: VELGKRFFPR CSAVLDQIMN CEDLTQLACG EDDTAEKRLQ KKQRYMEIQE TLKKAFSEDN LELGNSSLTD STSSTSKSTG GKRSNRKLSH RRR

Arabidopsis Description

NPR1Regulatory protein NPR1 [Source:UniProtKB/Swiss-Prot;Acc:P93002]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.