Factsheet for Bra016938.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra036832.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41370.1	Bra036832.1-P	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	98.77	98.77
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	97.74	97.74
Bra004617.1-P	Field mustard	cytosol	60.37	92.74
AT2G41370.1	Thale cress	cytosol	93.02	92.26
Bra004618.1-P	Field mustard	cytosol	31.01	82.97
Bra014645.1-P	Field mustard	cytosol	47.43	79.38
KRH66789	Soybean	cytosol	78.03	78.03
KRH72058	Soybean	cytosol	75.98	77.73
VIT_08s0007g05740.t01	Wine grape	cytosol	77.41	76.94
Bra007306.1-P	Field mustard	cytosol	72.69	76.62
PGSC0003DMT400027591	Potato	cytosol	72.28	76.36
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	71.66	75.54
PGSC0003DMT400076710	Potato	cytosol	75.36	75.36
Solyc04g040220.2.1	Tomato	cytosol	71.66	74.89
Solyc10g079750.1.1	Tomato	cytosol	74.54	74.39
PGSC0003DMT400021076	Potato	cytosol	73.51	73.06
GSMUA_AchrUn_...	Banana	cytosol	62.22	72.31
Solyc10g079460.1.1	Tomato	cytosol	73.31	72.27
GSMUA_Achr5P08160_001	Banana	cytosol	63.24	72.13
GSMUA_Achr5P16220_001	Banana	cytosol	65.09	71.88
GSMUA_Achr11P...	Banana	cytosol	63.04	71.06
GSMUA_Achr3P08710_001	Banana	cytosol	62.01	70.89
GSMUA_Achr8P22070_001	Banana	cytosol	57.91	67.95
Zm00001d011878_P001	Maize	cytosol	68.17	67.76
Os01t0948900-01	Rice	cytosol	46.61	67.36
OQU88196	Sorghum	cytosol	68.79	66.08
TraesCS3D01G484100.1	Wheat	cytosol	68.99	65.75
Zm00001d042111_P001	Maize	cytosol	68.38	65.55
TraesCS3B01G537400.1	Wheat	cytosol	68.99	65.37
TraesCS3A01G489000.1	Wheat	cytosol	68.99	65.37
HORVU3Hr1G106880.5	Barley	cytosol	68.38	64.91
GSMUA_AchrUn_...	Banana	cytosol	57.49	62.5
EES16520	Sorghum	cytosol	59.14	60.0
Zm00001d023246_P001	Maize	cytosol	58.52	60.0
Zm00001d052468_P002	Maize	cytosol	57.91	59.87
Solyc05g018160.1.1	Tomato	cytosol	34.09	59.29
Zm00001d004966_P001	Maize	cytosol	56.88	58.56
EES09234	Sorghum	cytosol	57.91	58.26
Os11t0141900-00	Rice	cytosol	58.93	58.1
TraesCS5A01G134700.2	Wheat	cytosol	58.73	58.01
TraesCS5B01G133700.1	Wheat	cytosol	58.73	58.01
TraesCS5D01G139600.1	Wheat	cytosol	58.73	58.01
Os12t0138500-01	Rice	cytosol	38.19	57.23
Bra021949.1-P	Field mustard	plastid	25.87	22.42
Bra013416.1-P	Field mustard	plastid	26.49	21.94
Bra025093.1-P	Field mustard	plastid	23.61	21.06
Bra027690.1-P	Field mustard	cytosol, plastid	24.02	20.53
Bra013950.1-P	Field mustard	cytosol	22.59	19.0
Bra013952.1-P	Field mustard	cytosol	22.18	17.85
Bra010439.1-P	Field mustard	cytosol	22.18	11.23

Protein Annotations

Gene3D:1.25.40.20	MapMan:15.5.4.7.2	Gene3D:3.30.710.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra016938	EnsemblPlants:Bra016938.1	EnsemblPlants:Bra016938.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M4DKA9
InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900	PFAM:PF12796	PFscan:PS50088	PFscan:PS50097
PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF116	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI00025452FD	SEG:seg	:	:

Description

AT2G41370 (E=6e-228) BOP2 | BOP2 (BLADE ON PETIOLE2); protein binding

Coordinates

chrA04:-:17497294..17499281

Molecular Weight (calculated)

53736.1 Da

IEP (calculated)

6.686

GRAVY (calculated)

-0.286

Length

487 amino acids

Sequence
(BLAST)

001: MSSLEESLRS MSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDQ PQSCIDPTRH GSVPASPTRG SQAPAGVIPA NSVGYEVFLL
101: LLQFLYSGQV SIVPQKHEPR PNCGERGCWH THCSAAVDLA LDTLAASRYF GVEQLALLTQ KQLASMVEKA SIEDVMKVLI ASRKQDMQQL WSTCSHLVAK
201: SGLPPEILAK HLTIDVVAKI EEIRLKTSIS RRSLMPHNHH HDLTVAQDLE DQKIRRMRRA LDSSDVELVK LMVMGEGLNL DESLALHYAV ESCSREVVKV
301: LLELGAADVN SPVCPAGKTP LHIAAEMVSP DMVAVFLDHH ADPNVRTVGG ITPLDILRTL TSDFLFKGAV PGLTHIEPNK LRLCLELVQS AAMVISREEG
401: NNSNNNNNDY NNPSYPQMNE EHNSGSSGGS NNNLDSRLVY LNLGAGTGQM GQGRDHGDDQ NSQREGMSRH NHHHHHDPST MYHQHHF

Best Arabidopsis Sequence Match ( AT2G41370.1 )
(BLAST)

001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F

Arabidopsis Description

NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.