Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G450200.1 | Wheat | cytosol | 70.33 | 70.33 |
| TraesCS3B01G497300.1 | Wheat | cytosol | 70.0 | 70.0 |
| TraesCS3A01G457400.1 | Wheat | cytosol | 69.33 | 69.33 |
| HORVU3Hr1G098530.4 | Barley | cytosol | 68.67 | 68.44 |
| EES04173 | Sorghum | cytosol | 60.67 | 63.64 |
| Zm00001d042193_P001 | Maize | cytosol | 59.67 | 61.3 |
| Solyc01g099290.2.1 | Tomato | cytosol | 21.33 | 24.06 |
| PGSC0003DMT400063662 | Potato | cytosol | 23.0 | 23.79 |
| Os01t0706200-01 | Rice | cytosol | 12.0 | 22.5 |
| AT1G59790.1 | Thale cress | cytosol | 26.33 | 21.12 |
| Os05t0193900-00 | Rice | cytosol | 19.0 | 14.14 |
| AT4G02570.1 | Thale cress | cytosol | 30.0 | 12.2 |
| CDY18013 | Canola | cytosol | 30.0 | 12.2 |
| CDX90932 | Canola | cytosol | 30.0 | 12.2 |
| Bra000874.1-P | Field mustard | cytosol | 30.0 | 12.2 |
| CDY22060 | Canola | cytosol | 29.67 | 12.06 |
| CDY21896 | Canola | cytosol | 29.67 | 12.06 |
| Os01t0369000-01 | Rice | cytosol | 29.67 | 11.96 |
| Os01t0369200-01 | Rice | cytosol | 29.0 | 11.66 |
| KRH68142 | Soybean | cytosol | 27.67 | 11.2 |
| KRG96405 | Soybean | cytosol | 27.0 | 10.98 |
| GSMUA_Achr9P17620_001 | Banana | cytosol | 26.0 | 10.58 |
| Bra036257.1-P | Field mustard | cytosol, nucleus, peroxisome | 29.67 | 9.03 |
| Os02t0746000-01 | Rice | cytosol | 22.0 | 8.97 |
| Os04t0643000-01 | Rice | cytosol, plasma membrane | 19.67 | 8.07 |
| Os08t0170900-01 | Rice | cytosol | 19.67 | 8.07 |
| Os03t0786800-01 | Rice | cytosol, plasma membrane | 1.67 | 3.23 |
| Os05t0149600-02 | Rice | cytosol, plasma membrane | 2.67 | 3.09 |
Protein Annotations
| Gene3D:1.20.1310.10 | MapMan:35.1 | EntrezGene:4326791 | ProteinID:BAD87173.1 | ProteinID:BAD87250.1 | ProteinID:BAF07232.1 |
| ProteinID:BAS76084.1 | InterPro:Cullin_N | InterPro:Cullin_repeat-like_dom_sf | ProteinID:EAZ14751.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031461 | GO:GO:0031625 | GO:GO:0061630 | EnsemblPlantsGene:Os01g0935300 |
| EnsemblPlants:Os01t0935300-02 | PFAM:PF00888 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF83 | UniProt:Q5JMQ6 | SUPFAM:SSF74788 |
| UniParc:UPI00004C28D3 | RefSeq:XP_015625736.1 | : | : | : | : |
Description
Similar to cullin-1. (Os01t0935300-01);Cullin family protein. (Os01t0935300-02)
Coordinates
chr1:+:41052375..41056409
Molecular Weight (calculated)
35020.2 Da
IEP (calculated)
6.100
GRAVY (calculated)
-0.337
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MNEHLRFEDG WKILEQGIVK CSKLLEDCPG GRPTVNEYMN YYDCAYRMAV QKDQYCQEMY NSYKATHESC VCAMVLPHLM HKQGDLFWRE LVKMWSNYCA
101: MIRFTTGFLA YLDRCFVTHK KLPSLEDAAA TSFFSPVFSY FNNEISDVLL TLIRQERDGC NVDMDLLMGI MRGICRSEVK TKLKSAVIQD TYLYYSRKSY
201: EWIVQYPLQD YLAKVQETVQ KEMKRLIHYL CISEEEGSGL CLKAVSAPLM QAYENYTKEK HIGGQVLLQT YKTVEDDLLD RCSRLTIDNG LDNNSFSHME
101: MIRFTTGFLA YLDRCFVTHK KLPSLEDAAA TSFFSPVFSY FNNEISDVLL TLIRQERDGC NVDMDLLMGI MRGICRSEVK TKLKSAVIQD TYLYYSRKSY
201: EWIVQYPLQD YLAKVQETVQ KEMKRLIHYL CISEEEGSGL CLKAVSAPLM QAYENYTKEK HIGGQVLLQT YKTVEDDLLD RCSRLTIDNG LDNNSFSHME
001: MATILFKVIM MKELILLEEG WSVMKTGVAK LQRILEDLSE PPFDPGQYIN LYTIIYDMCL QQPPNDYSQE LYNKYRGVVD HYNKETVLPS MRERHGEYML
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A
Arabidopsis Description
Putative cullin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P0CH31]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.