Factsheet for Os11t0637300-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0935300-02
Os05t0193900-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G05460.1	Os01t0935300-02	AT4G02570.1	12795696
AT4G05460.1	Os05t0193900-00	AT4G02570.1	12795696

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0193200-00	Rice	cytosol	48.33	50.43
Os08t0193500-00	Rice	cytosol	50.83	27.85
Os08t0195000-00	Rice	cytosol, peroxisome, plastid	50.0	24.0
Os08t0194350-00	Rice	cytosol	52.5	23.68
Zm00001d024252_P001	Maize	cytosol	49.17	22.35
TraesCS2B01G178700.1	Wheat	plastid	55.83	21.68
TraesCS2D01G159000.1	Wheat	plastid	55.0	21.36
HORVU2Hr1G027710.1	Barley	cytosol	51.67	21.31
KXG24675	Sorghum	cytosol	50.83	21.18
TraesCS2A01G153600.1	Wheat	cytosol, plastid	54.17	21.04
HORVU2Hr1G027770.2	Barley	mitochondrion	52.5	20.86
CDY21988	Canola	cytosol	25.83	20.53
CDX77948	Canola	cytosol	25.83	18.34
CDY21990	Canola	cytosol	26.67	16.67
Os02t0317500-01	Rice	cytosol	45.0	16.36
Os08t0195900-00	Rice	cytosol, mitochondrion, nucleus, plastid	39.17	15.56
Os02t0317300-01	Rice	cytosol	40.83	14.94
CDX99649	Canola	cytosol	26.67	13.73
Bra034231.1-P	Field mustard	cytosol, plastid	29.17	13.51
VIT_10s0003g04300.t01	Wine grape	cytosol	35.83	13.4
CDY15937	Canola	cytosol	25.83	13.3
AT4G05497.1	Thale cress	plastid	26.67	13.01
CDY48578	Canola	cytosol	26.67	12.75
Bra030342.1-P	Field mustard	cytosol	24.17	12.45
Os08t0196200-01	Rice	cytosol	27.5	12.04
Bra034229.1-P	Field mustard	cytosol	27.5	11.96
AT4G05460.1	Thale cress	cytosol	29.17	11.59
KRH21099	Soybean	cytosol	30.0	11.58
CDY62000	Canola	plastid	31.67	11.55
Bra034230.1-P	Field mustard	cytosol	25.0	11.41
CDY48580	Canola	cytosol	29.17	11.4
AT4G05490.1	Thale cress	plastid	29.17	11.4
Bra000816.1-P	Field mustard	plastid	30.83	11.38
PGSC0003DMT400016134	Potato	cytosol	27.5	11.38
CDY48575	Canola	plastid	30.0	11.36
CDY48577	Canola	cytosol	26.67	11.35
CDX73787	Canola	cytosol	24.17	11.33
Bra034227.1-P	Field mustard	plastid	30.0	11.32
CDY21333	Canola	nucleus, plastid	27.5	11.22
Bra034226.1-P	Field mustard	cytosol	26.67	11.11
CDY48574	Canola	cytosol	27.5	11.07
Bra030690.1-P	Field mustard	cytosol	25.83	11.03
CDY15618	Canola	cytosol	25.83	11.03
KRH11147	Soybean	cytosol	29.17	11.01
PGSC0003DMT400090939	Potato	cytosol	27.5	10.89
CDY10283	Canola	cytosol	28.33	10.83
CDY21986	Canola	cytosol, plastid	26.67	10.67
CDX90789	Canola	cytosol	26.67	10.63
Solyc08g006940.2.1	Tomato	cytosol	27.5	10.61
Os08t0193900-01	Rice	nucleus	35.0	10.61
PGSC0003DMT400052833	Potato	cytosol	24.17	10.55
CDY48576	Canola	cytosol	25.83	10.44
PGSC0003DMT400054358	Potato	cytosol	29.17	10.32
CDY09910	Canola	nucleus	27.5	10.31
CDY59275	Canola	plastid	27.5	10.28
PGSC0003DMT400015035	Potato	cytosol	25.83	10.13
Os08t0195800-00	Rice	cytosol, mitochondrion, nucleus	29.17	10.12
Solyc08g013800.2.1	Tomato	cytosol	24.17	9.86
PGSC0003DMT400015030	Potato	cytosol	24.17	9.8
CDX86473	Canola	cytosol	20.83	9.77
Bra034228.1-P	Field mustard	cytosol	24.17	9.76
AT4G05475.1	Thale cress	cytosol	25.0	9.71
CDY06267	Canola	nucleus	27.5	9.48
AT4G05470.1	Thale cress	cytosol, plastid	24.17	9.48
Bra031582.1-P	Field mustard	nucleus	26.67	9.14
AT4G03630.1	Thale cress	cytosol	15.83	8.64
Os08t0193300-00	Rice	cytosol	23.33	8.41
Solyc08g013820.2.1	Tomato	cytosol	25.0	8.06
AT5G52480.1	Thale cress	cytosol	14.17	7.05
CDY22112	Canola	cytosol	27.5	6.85
Bra034194.1-P	Field mustard	cytosol	27.5	6.17
Bra000723.1-P	Field mustard	cytosol	7.5	5.92
Bra020205.1-P	Field mustard	plastid	26.67	5.64
CDY09154	Canola	plastid	26.67	5.64
Solyc08g006920.1.1	Tomato	cytosol, mitochondrion, nucleus	9.17	3.63
Os08t0191300-00	Rice	cytosol, golgi	6.67	3.11
PGSC0003DMT400058969	Potato	cytosol	1.67	2.25
Bra000817.1-P	Field mustard	plastid	2.5	1.67
Os08t0194000-00	Rice	cytosol, vacuole	2.5	0.79
Solyc08g013780.1.1	Tomato	cytosol	0.0	0.0
CDY21989	Canola	cytosol	0.0	0.0
CDY21983	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Os11t0637300-00	EnsemblPlantsGene:Os11g0637300	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR44078	PFAM:PF12937	ProteinID:BAT14979.1
SEG:seg	SUPFAM:SSF81383	UniParc:UPI000393AB9C	UniProt:A0A0P0Y4Y4	MapMan:35.2	:

Description

F-box protein 629Hypothetical conserved gene. (Os11t0637300-00)

Coordinates

chr11:+:25171719..25172081

Molecular Weight (calculated)

12976.8 Da

IEP (calculated)

4.450

GRAVY (calculated)

0.214

Length

120 amino acids

Sequence
(BLAST)

001: MDVLLLPPLP APETTAPAGR DWSELPADVL SVVFAKVGAV EVLAGAGLAC RSWLDAARVP ELWRAVDMLR GAVRCLHLGQ DRDLMCAMAK VAVDRSGGRL
101: EVFKGEDFVS DELLEYIGDR

Best Arabidopsis Sequence Match ( AT4G05497.1 )
(BLAST)

001: MSSSSSSPFP QAMKNGEYRN WAELPPELTS SILLRLGAIE ILQNAQRVCK SWRRVCQDPS MWRKIDIRIK ENLVNSVELF YVIEPLCCRA VDLSQGGLLE
101: INIDYLVNTS FLNYIADRSS NLRRLGVVDC APVLSRGVVE AAMKLPLLEE LDITYKSSIR EQELKVVGQS CPNLRTLKLN CTGDVKCCDK VALAIAETMP
201: GLRHLQLFRN GLSETGLNAI LEGCPHLKNL GLHQCLNINI VGDIVK

Arabidopsis Description

FBL9Putative F-box/LRR-repeat protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9V8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.