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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, plastid, vacuole
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:plastid
TargetP:plastid
WoLF PSORT:vacuole
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS3A01G457400.1
TraesCS3B01G497300.1
TraesCS3D01G450200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G05460.1 TraesCS3A01G457400.1 AT4G02570.1 12795696
AT4G05460.1 TraesCS3B01G497300.1 AT4G02570.1 12795696
AT4G05460.1 TraesCS3D01G450200.1 AT4G02570.1 12795696
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G178700.1 Wheat plastid 95.15 95.15
TraesCS2A01G153600.1 Wheat cytosol, plastid 93.2 93.2
HORVU2Hr1G027710.1 Barley cytosol 83.82 89.0
HORVU2Hr1G027770.2 Barley mitochondrion 85.76 87.75
Os11t0637300-00 Rice cytosol 21.36 55.0
TraesCS5D01G100900.1 Wheat endoplasmic reticulum 29.45 52.91
TraesCS5D01G484300.1 Wheat cytosol 33.98 51.72
TraesCS5D01G468200.1 Wheat cytosol, plasma membrane, plastid 32.04 49.01
TraesCS5D01G292400.1 Wheat cytosol 45.31 40.7
TraesCS7D01G555100.1 Wheat cytosol 42.39 39.1
CDY21988 Canola cytosol 17.8 36.42
TraesCS1D01G126200.1 Wheat nucleus 32.69 34.71
TraesCS5D01G088900.1 Wheat cytosol 34.3 34.64
TraesCS1D01G034100.1 Wheat cytosol 36.57 34.45
CDY48578 Canola cytosol 27.18 33.47
AT4G03630.1 Thale cress cytosol 23.62 33.18
CDX77948 Canola cytosol 18.12 33.14
Bra034230.1-P Field mustard cytosol 28.16 33.08
Bra034229.1-P Field mustard cytosol 29.45 32.97
Os08t0195000-00 Rice cytosol, peroxisome, plastid 26.54 32.8
TraesCS7D01G300400.1 Wheat mitochondrion, nucleus 36.25 32.37
CDX99649 Canola cytosol 24.27 32.19
CDX73787 Canola cytosol 26.54 32.03
Bra034226.1-P Field mustard cytosol 29.77 31.94
CDY15937 Canola cytosol 23.95 31.76
TraesCS3D01G405300.1 Wheat nucleus 35.92 31.71
TraesCS7D01G194300.1 Wheat cytosol 30.74 31.56
TraesCS2D01G070200.1 Wheat cytosol 33.01 31.48
TraesCS7D01G194400.1 Wheat extracellular 32.04 31.33
TraesCS2D01G311900.1 Wheat cytosol 31.39 30.99
Bra030342.1-P Field mustard cytosol 23.3 30.9
CDY48577 Canola cytosol 28.16 30.85
CDY48576 Canola cytosol 29.13 30.3
CDY21333 Canola nucleus, plastid 28.8 30.27
KRH21099 Soybean cytosol 30.42 30.23
TraesCS7D01G381100.1 Wheat mitochondrion 33.33 30.21
CDY21986 Canola cytosol, plastid 29.13 30.0
CDY48580 Canola cytosol 29.77 29.97
Bra034228.1-P Field mustard cytosol 28.48 29.63
Bra034227.1-P Field mustard plastid 30.42 29.56
Bra034231.1-P Field mustard cytosol, plastid 24.6 29.34
CDY48575 Canola plastid 30.1 29.34
KRH11147 Soybean cytosol 30.1 29.25
CDX90789 Canola cytosol 28.48 29.24
CDY48574 Canola cytosol 28.16 29.19
Os08t0191300-00 Rice cytosol, golgi 24.27 29.18
PGSC0003DMT400016134 Potato cytosol 26.86 28.62
AT4G05460.1 Thale cress cytosol 27.83 28.48
AT4G05497.1 Thale cress plastid 22.65 28.46
CDY21989 Canola cytosol 7.44 28.4
Bra000817.1-P Field mustard plastid 16.5 28.33
CDY15618 Canola cytosol 25.57 28.11
Bra030690.1-P Field mustard cytosol 25.57 28.11
AT5G52480.1 Thale cress cytosol 21.68 27.8
VIT_10s0003g04300.t01 Wine grape cytosol 28.8 27.73
CDY59275 Canola plastid 28.8 27.73
AT4G05490.1 Thale cress plastid 27.51 27.69
Solyc08g006940.2.1 Tomato cytosol 27.83 27.65
TraesCS3D01G413100.1 Wheat cytosol, endoplasmic reticulum, vacuole 31.07 27.59
AT4G05475.1 Thale cress cytosol 27.51 27.51
CDY10283 Canola cytosol 27.83 27.39
CDY62000 Canola plastid 29.13 27.36
CDX86473 Canola cytosol 22.65 27.34
TraesCS5D01G484100.1 Wheat cytosol 32.69 27.22
PGSC0003DMT400015035 Potato cytosol 26.86 27.12
AT4G05470.1 Thale cress cytosol, plastid 26.86 27.12
PGSC0003DMT400058969 Potato cytosol 7.77 26.97
PGSC0003DMT400052833 Potato cytosol 23.95 26.91
Solyc08g013800.2.1 Tomato cytosol 25.57 26.87
TraesCS2D01G011000.1 Wheat cytosol 27.18 26.42
PGSC0003DMT400015030 Potato cytosol 25.24 26.35
Bra000816.1-P Field mustard plastid 27.51 26.15
TraesCS4D01G274100.1 Wheat cytosol 11.97 26.06
CDY09910 Canola nucleus 26.86 25.94
PGSC0003DMT400054358 Potato cytosol 28.16 25.66
TraesCS7D01G203600.1 Wheat plastid 28.16 25.51
Solyc08g013780.1.1 Tomato cytosol 10.03 25.2
TraesCS3D01G413000.1 Wheat cytosol 35.6 25.11
PGSC0003DMT400090939 Potato cytosol 24.6 25.08
CDY21990 Canola cytosol 15.53 25.0
CDY06267 Canola nucleus 28.16 25.0
Bra031582.1-P Field mustard nucleus 27.83 24.57
TraesCS7D01G203500.1 Wheat plastid 26.86 24.41
TraesCS3D01G412900.1 Wheat cytosol, plastid 36.25 23.93
Bra000723.1-P Field mustard cytosol 11.0 22.37
Solyc08g013820.2.1 Tomato cytosol 26.21 21.77
CDY21983 Canola cytosol 16.5 18.02
Solyc08g006920.1.1 Tomato cytosol, mitochondrion, nucleus 16.5 16.83
Bra034194.1-P Field mustard cytosol 27.51 15.89
Bra020205.1-P Field mustard plastid 28.48 15.52
CDY09154 Canola plastid 28.48 15.52
CDY22112 Canola cytosol 23.3 14.94
Protein Annotations
EnsemblPlants:TraesCS2D01G159000.1EnsemblPlantsGene:TraesCS2D01G159000Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:F-box-like_dom_sfInterPro:F-box_domInterPro:IPR001810InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rpt_2
PANTHER:PTHR44078PANTHER:PTHR44078:SF5PFAM:PF07723PFAM:PF12937SEG:segSUPFAM:SSF52047
SUPFAM:SSF81383MapMan:35.1::::
Description
No Description!
Coordinates
chr2D:+:102541505..102543532
Molecular Weight (calculated)
34701.3 Da
IEP (calculated)
6.697
GRAVY (calculated)
0.021
Length
309 amino acids
Sequence
(BLAST)
001: MLQASPQSPI MMSGVSFVVS RGVCRSRLSH SYEMEVQPEA VRDWSDLPLD VLALVFAKLG AVDILMGAGL VCHSWLEAAK VPSLWRYVDM EHHDVLRGKK
101: KKSRDVLCAM AKAAVDRSNG QLEVFAGSEF VTDQLLKYIA ERSPSLKSLS LDYCNVTNEA FTELIIKLPL LEELLISLCP FVDGDAYEVT SRACAQLKRL
201: MLRQGSYGGI RDGALGIEMM HELRYLTLVN SNITTEELVA IIDGCPHMER LCVRNCCNIV VDGTLRAKCS RIKTLILPPL QHMQNVRSRY IFHPDDSLFT
301: DKFDDWRSS
Best Arabidopsis Sequence Match ( AT4G05460.1 )
(BLAST)
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.