Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034229.1-P | Field mustard | cytosol | 83.69 | 85.51 |
| CDY21988 | Canola | cytosol | 33.69 | 62.91 |
| CDY48578 | Canola | cytosol | 52.48 | 58.96 |
| CDY48576 | Canola | cytosol | 59.22 | 56.23 |
| CDY21986 | Canola | cytosol, plastid | 59.22 | 55.67 |
| CDY48580 | Canola | cytosol | 58.51 | 53.75 |
| CDY48574 | Canola | cytosol | 56.74 | 53.69 |
| CDY21333 | Canola | nucleus, plastid | 54.61 | 52.38 |
| CDX99649 | Canola | cytosol | 43.26 | 52.36 |
| CDY15937 | Canola | cytosol | 42.91 | 51.93 |
| CDX77948 | Canola | cytosol | 30.85 | 51.48 |
| CDX73787 | Canola | cytosol | 45.04 | 49.61 |
| CDX90789 | Canola | cytosol | 52.84 | 49.5 |
| CDY21990 | Canola | cytosol | 33.33 | 48.96 |
| CDY59275 | Canola | plastid | 55.67 | 48.91 |
| CDY62000 | Canola | plastid | 56.74 | 48.63 |
| CDY21989 | Canola | cytosol | 13.83 | 48.15 |
| CDY09910 | Canola | nucleus | 52.84 | 46.56 |
| CDY48575 | Canola | plastid | 52.13 | 46.37 |
| CDY15618 | Canola | cytosol | 44.68 | 44.84 |
| CDX86473 | Canola | cytosol | 40.07 | 44.14 |
| CDY10283 | Canola | cytosol | 48.58 | 43.63 |
| CDY06267 | Canola | nucleus | 52.13 | 42.24 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 42.2 | 37.07 |
| PGSC0003DMT400016134 | Potato | cytosol | 37.94 | 36.9 |
| KRH21099 | Soybean | cytosol | 40.07 | 36.33 |
| Solyc08g013800.2.1 | Tomato | cytosol | 37.23 | 35.71 |
| PGSC0003DMT400052833 | Potato | cytosol | 34.75 | 35.64 |
| PGSC0003DMT400015030 | Potato | cytosol | 37.23 | 35.47 |
| PGSC0003DMT400015035 | Potato | cytosol | 38.3 | 35.29 |
| KRH11147 | Soybean | cytosol | 39.72 | 35.22 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 30.85 | 33.72 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 31.91 | 33.71 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 12.41 | 33.33 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 23.76 | 33.0 |
| Solyc08g006940.2.1 | Tomato | cytosol | 36.17 | 32.8 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 23.4 | 32.67 |
| PGSC0003DMT400058969 | Potato | cytosol | 10.28 | 32.58 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 19.15 | 32.53 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 23.4 | 32.51 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 23.05 | 32.02 |
| CDY22112 | Canola | cytosol | 54.61 | 31.95 |
| PGSC0003DMT400090939 | Potato | cytosol | 34.04 | 31.68 |
| Zm00001d024252_P001 | Maize | cytosol | 29.08 | 31.06 |
| Solyc08g013780.1.1 | Tomato | cytosol | 13.48 | 30.89 |
| PGSC0003DMT400054358 | Potato | cytosol | 36.88 | 30.68 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 22.34 | 30.29 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 21.99 | 30.24 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 18.44 | 30.23 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 18.44 | 30.23 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 23.76 | 29.91 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 10.99 | 29.25 |
| Solyc08g013820.2.1 | Tomato | cytosol | 38.3 | 29.03 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 31.56 | 28.8 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 29.43 | 28.52 |
| TraesCS2B01G178700.1 | Wheat | plastid | 31.21 | 28.48 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 9.93 | 28.28 |
| TraesCS2D01G159000.1 | Wheat | plastid | 30.85 | 28.16 |
| KXG24675 | Sorghum | cytosol | 28.72 | 28.12 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 34.4 | 28.12 |
| CDY21983 | Canola | cytosol | 28.01 | 27.92 |
| Zm00001d010914_P001 | Maize | cytosol | 32.27 | 27.83 |
| Os08t0193200-00 | Rice | cytosol | 11.35 | 27.83 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 32.27 | 27.74 |
| CDY09154 | Canola | plastid | 55.67 | 27.69 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 32.27 | 27.58 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 29.43 | 27.48 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 31.56 | 27.47 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 29.79 | 27.45 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 29.79 | 27.45 |
| Os08t0194350-00 | Rice | cytosol | 25.89 | 27.44 |
| Os02t0317300-01 | Rice | cytosol | 31.91 | 27.44 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 31.91 | 27.44 |
| EES17669 | Sorghum | cytosol | 32.27 | 27.41 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 28.37 | 27.12 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 32.98 | 26.88 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 33.33 | 26.86 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 33.33 | 26.86 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 27.66 | 26.8 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 29.43 | 26.69 |
| Os11t0637300-00 | Rice | cytosol | 11.35 | 26.67 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 32.98 | 26.57 |
| KXG24670 | Sorghum | cytosol | 29.79 | 26.5 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 20.92 | 26.34 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 31.56 | 26.25 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 29.08 | 26.2 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 29.08 | 26.2 |
| Os02t0317500-01 | Rice | cytosol | 30.5 | 26.06 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 31.91 | 26.01 |
| EES14679 | Sorghum | nucleus | 31.56 | 25.87 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 28.01 | 25.82 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 31.21 | 25.43 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 20.92 | 25.32 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 29.08 | 25.31 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 28.72 | 25.0 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 27.3 | 25.0 |
| Zm00001d024265_P001 | Maize | cytosol | 26.6 | 25.0 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 17.02 | 24.87 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 27.3 | 24.84 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 29.79 | 24.78 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 28.37 | 24.77 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 28.01 | 24.69 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 26.95 | 24.68 |
| Os08t0193500-00 | Rice | cytosol | 19.15 | 24.66 |
| Zm00001d046526_P001 | Maize | plastid | 24.47 | 24.38 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 27.3 | 24.37 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 29.43 | 24.34 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 27.3 | 23.99 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 25.53 | 23.92 |
| TraesCS6B01G067700.1 | Wheat | plastid | 22.7 | 23.88 |
| Zm00001d024764_P001 | Maize | cytosol | 29.79 | 23.53 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 18.44 | 23.42 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 27.66 | 23.28 |
| TraesCS6B01G310200.1 | Wheat | plastid | 29.79 | 23.27 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 25.89 | 22.96 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 9.57 | 22.88 |
| TraesCS7D01G203600.1 | Wheat | plastid | 26.95 | 22.29 |
| OQU80048 | Sorghum | cytosol | 22.34 | 22.11 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 10.99 | 21.83 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 27.3 | 21.81 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 26.6 | 21.8 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 27.3 | 21.75 |
| Os08t0193900-01 | Rice | nucleus | 30.5 | 21.72 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 26.95 | 21.71 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 21.63 | 21.71 |
| OQU80174 | Sorghum | cytosol | 10.28 | 21.64 |
| OQU80176 | Sorghum | mitochondrion | 17.02 | 21.52 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 26.24 | 21.51 |
| TraesCS7D01G203500.1 | Wheat | plastid | 25.89 | 21.47 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 25.89 | 21.41 |
| HORVU2Hr1G077990.2 | Barley | plastid | 28.01 | 21.12 |
| Os08t0191300-00 | Rice | cytosol, golgi | 19.15 | 21.01 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 29.08 | 20.71 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 25.53 | 20.69 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 15.6 | 20.66 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 24.11 | 20.61 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 21.99 | 20.46 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 31.21 | 20.37 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 24.82 | 20.29 |
| Os08t0193300-00 | Rice | cytosol | 23.4 | 19.82 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 17.38 | 19.6 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 19.86 | 18.54 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 30.85 | 18.51 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 19.5 | 18.39 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 17.38 | 18.15 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 15.6 | 18.11 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 26.95 | 17.35 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 28.37 | 17.09 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 26.95 | 17.08 |
| TraesCS3B01G452300.1 | Wheat | plastid | 28.01 | 16.99 |
| TraesCS6A01G051000.1 | Wheat | plastid | 22.34 | 16.94 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 28.01 | 16.67 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 23.05 | 16.62 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 27.3 | 16.28 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 21.28 | 16.17 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 28.37 | 16.13 |
| Os08t0196200-01 | Rice | cytosol | 9.22 | 9.49 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 1.77 | 1.32 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A078IF31 | EnsemblPlants:CDY48577 | ProteinID:CDY48577 | ProteinID:CDY48577.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00091313001 |
| InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PFAM:PF00646 | PFscan:PS50181 | PANTHER:PTHR44078 |
| PANTHER:PTHR44078:SF5 | SMART:SM00256 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI0004EDC305 | SEG:seg |
Description
BnaA09g01730DBnaA09g01730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IF31]
Coordinates
chrLK032779:+:122277..123716
Molecular Weight (calculated)
31979.7 Da
IEP (calculated)
4.783
GRAVY (calculated)
-0.078
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPSTPVM KEDGECRNWS ELPYELMASI LCRLCTIDIL ENVQKVCTSW HRVCKDPEMW RKIEFRYIGD KEYNLEIMCR HAVDRSQGGL LEIDISCFGT
101: DSLLNYIADR SSNLRSLKLT LISVTTVGLA EAIGKLPLLE ELQITEFAMW EGYLKVVGQS CPKLNTLKLN CFRIGFDPPF YVSDDDALAI AETMHGLRFL
201: KLFSNGLTDA GLKAILDNCP DLEHLDLNHC FNVNFSGDLE KRCSERIKFQ ILVSQHNPEK AGDDDLLLLI MEEICLPSHH TL
101: DSLLNYIADR SSNLRSLKLT LISVTTVGLA EAIGKLPLLE ELQITEFAMW EGYLKVVGQS CPKLNTLKLN CFRIGFDPPF YVSDDDALAI AETMHGLRFL
201: KLFSNGLTDA GLKAILDNCP DLEHLDLNHC FNVNFSGDLE KRCSERIKFQ ILVSQHNPEK AGDDDLLLLI MEEICLPSHH TL
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.