CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034231.1-P	Field mustard	cytosol, plastid	79.8	94.59
CDY21988	Canola	cytosol	36.16	73.51
CDY48574	Canola	cytosol	68.08	70.13
CDY21990	Canola	cytosol	43.65	69.79
CDY48578	Canola	cytosol	54.07	66.14
CDY21333	Canola	nucleus, plastid	60.59	63.27
CDY48576	Canola	cytosol	60.91	62.96
CDY21986	Canola	cytosol, plastid	59.28	60.67
CDY59275	Canola	plastid	62.87	60.12
CDY62000	Canola	plastid	62.87	58.66
CDY48577	Canola	cytosol	53.75	58.51
CDY09910	Canola	nucleus	60.91	58.44
CDX90789	Canola	cytosol	57.0	58.14
CDX77948	Canola	cytosol	31.6	57.4
CDY15618	Canola	cytosol	52.44	57.3
CDX86473	Canola	cytosol	46.58	55.86
CDX73787	Canola	cytosol	45.93	55.08
CDY48575	Canola	plastid	56.35	54.57
CDX99649	Canola	cytosol	41.37	54.51
CDY15937	Canola	cytosol	41.04	54.08
CDY06267	Canola	nucleus	59.61	52.59
CDY10283	Canola	cytosol	52.44	51.27
CDY21989	Canola	cytosol	12.38	46.91
VIT_10s0003g04300.t01	Wine grape	cytosol	48.21	46.11
KRH21099	Soybean	cytosol	46.25	45.66
KRH11147	Soybean	cytosol	44.63	43.08
Solyc08g013800.2.1	Tomato	cytosol	40.72	42.52
PGSC0003DMT400052833	Potato	cytosol	36.16	40.36
PGSC0003DMT400016134	Potato	cytosol	38.11	40.34
Solyc08g006940.2.1	Tomato	cytosol	40.39	39.87
PGSC0003DMT400015030	Potato	cytosol	38.44	39.86
Solyc08g013780.1.1	Tomato	cytosol	15.96	39.84
PGSC0003DMT400058969	Potato	cytosol	11.4	39.33
TraesCS7A01G304900.1	Wheat	mitochondrion, nucleus	33.88	38.95
PGSC0003DMT400015035	Potato	cytosol	38.76	38.89
TraesCS3B01G443100.1	Wheat	cytosol	32.57	38.76
PGSC0003DMT400090939	Potato	cytosol	37.46	37.95
TraesCS5B01G081700.1	Wheat	cytosol	20.52	37.95
CDY21983	Canola	cytosol	34.53	37.46
TraesCS5B01G466500.1	Wheat	extracellular	12.38	36.19
TraesCS4B01G183700.1	Wheat	cytosol	33.55	34.92
CDY22112	Canola	cytosol	54.72	34.85
PGSC0003DMT400054358	Potato	cytosol	38.11	34.51
TraesCS5D01G484300.1	Wheat	cytosol	22.8	34.48
Zm00001d024252_P001	Maize	cytosol	29.32	34.09
TraesCS1D01G126200.1	Wheat	nucleus	32.25	34.02
TraesCS2A01G071400.1	Wheat	cytosol	11.73	33.96
TraesCS3B01G443800.1	Wheat	nucleus	38.11	33.91
TraesCS4B01G183800.1	Wheat	cytosol	33.55	33.66
TraesCS5D01G088900.1	Wheat	cytosol	33.55	33.66
TraesCS1A01G128000.1	Wheat	cytosol	25.41	33.48
CDY09154	Canola	plastid	61.56	33.33
TraesCS5A01G075400.1	Wheat	cytosol	33.22	33.33
TraesCS7B01G205200.1	Wheat	mitochondrion	37.46	33.24
TraesCS5D01G468200.1	Wheat	cytosol, plasma membrane, plastid	21.82	33.17
TraesCS3A01G410700.1	Wheat	mitochondrion	37.78	33.14
EES14679	Sorghum	nucleus	37.13	33.14
TraesCS5D01G100900.1	Wheat	endoplasmic reticulum	18.57	33.14
TraesCS3A01G411000.1	Wheat	nucleus	36.48	33.04
TraesCS1D01G034100.1	Wheat	cytosol	35.18	32.93
TraesCS3B01G444000.1	Wheat	nucleus	37.46	32.86
HORVU1Hr1G004970.3	Barley	cytosol	34.53	32.72
TraesCS7D01G300400.1	Wheat	mitochondrion, nucleus	36.81	32.66
TraesCS1A01G033100.1	Wheat	cytosol	34.85	32.62
TraesCS3D01G405300.1	Wheat	nucleus	37.13	32.57
TraesCS5B01G094800.1	Wheat	endoplasmic reticulum	18.24	32.56
EES17669	Sorghum	cytosol	35.18	32.53
TraesCS7A01G193100.1	Wheat	cytosol	32.57	32.47
TraesCS7B01G098400.1	Wheat	cytosol	32.57	32.47
Zm00001d010914_P001	Maize	cytosol	34.53	32.42
Os08t0195800-00	Rice	cytosol, mitochondrion, nucleus	36.48	32.37
Os08t0194350-00	Rice	cytosol	28.01	32.33
Os02t0317300-01	Rice	cytosol	34.53	32.32
Os02t0317500-01	Rice	cytosol	34.53	32.12
Solyc08g013820.2.1	Tomato	cytosol	38.76	31.99
TraesCS7D01G381100.1	Wheat	mitochondrion	35.5	31.96
HORVU0Hr1G019800.1	Barley	cytosol	32.25	31.94
TraesCS7D01G194300.1	Wheat	cytosol	31.27	31.89
TraesCS2D01G070200.1	Wheat	cytosol	33.55	31.79
TraesCS7D01G194400.1	Wheat	extracellular	32.57	31.65
TraesCS7B01G287400.1	Wheat	cytosol	33.22	31.58
TraesCS5A01G471800.1	Wheat	cytosol	20.85	31.53
TraesCS5B01G484300.1	Wheat	cytosol	20.85	31.53
TraesCS1B01G041200.1	Wheat	cytosol	33.88	31.52
Zm00001d024265_P001	Maize	cytosol	30.62	31.33
HORVU2Hr1G027710.1	Barley	cytosol	29.64	31.27
TraesCS2A01G313400.1	Wheat	cytosol	31.6	31.19
TraesCS2B01G332200.1	Wheat	cytosol	31.6	30.99
TraesCS5B01G484500.1	Wheat	cytosol	20.52	30.73
TraesCS2D01G311900.1	Wheat	cytosol	31.27	30.67
TraesCS2B01G085400.1	Wheat	cytosol	31.92	30.62
KXG24675	Sorghum	cytosol	28.66	30.56
TraesCS2B01G085200.1	Wheat	cytosol	32.25	30.56
HORVU5Hr1G020150.1	Barley	mitochondrion	33.55	30.38
HORVU2Hr1G027770.2	Barley	mitochondrion	29.64	30.13
TraesCS2A01G153600.1	Wheat	cytosol, plastid	30.29	30.1
OQU80176	Sorghum	mitochondrion	21.82	30.04
TraesCS5B01G484100.1	Wheat	cytosol	21.82	29.91
TraesCS5B01G484600.1	Wheat	cytosol	20.2	29.81
TraesCS2D01G159000.1	Wheat	plastid	29.97	29.77
Os08t0193200-00	Rice	cytosol	11.07	29.57
TraesCS2B01G178700.1	Wheat	plastid	29.64	29.45
KXG24670	Sorghum	cytosol	30.29	29.34
Zm00001d046526_P001	Maize	plastid	27.04	29.33
Os08t0193500-00	Rice	cytosol	20.85	29.22
Os11t0637300-00	Rice	cytosol	11.4	29.17
OQU80048	Sorghum	cytosol	26.38	28.42
TraesCS7A01G484100.1	Wheat	cytosol	9.12	28.28
Os08t0193900-01	Rice	nucleus	36.16	28.03
TraesCS2D01G011000.1	Wheat	cytosol	28.99	27.99
TraesCS2B01G385500.1	Wheat	cytosol, plasma membrane, plastid	20.2	27.68
Zm00001d024764_P001	Maize	cytosol	31.92	27.45
Zm00001d046527_P001	Maize	extracellular, mitochondrion, nucleus	19.54	27.03
TraesCS5B01G484200.1	Wheat	cytosol, peroxisome, plastid	16.94	26.94
HORVU2Hr1G020540.2	Barley	cytosol	24.43	26.69
TraesCS7B01G480000.1	Wheat	cytosol	27.69	26.48
TraesCS7D01G203500.1	Wheat	plastid	28.99	26.18
TraesCS3D01G413100.1	Wheat	cytosol, endoplasmic reticulum, vacuole	29.64	26.15
TraesCS5D01G292400.1	Wheat	cytosol	28.99	25.87
TraesCS3B01G452600.1	Wheat	extracellular	27.69	25.76
TraesCS6B01G067700.1	Wheat	plastid	22.48	25.75
TraesCS7D01G203600.1	Wheat	plastid	28.34	25.51
TraesCS2A01G119000.1	Wheat	nucleus	35.83	25.46
TraesCS6B01G112100.1	Wheat	mitochondrion	28.99	25.43
HORVU2Hr1G020470.1	Barley	mitochondrion	9.77	25.42
TraesCSU01G016500.1	Wheat	mitochondrion	29.32	25.42
HORVU6Hr1G014660.1	Barley	cytosol	17.59	25.35
TraesCS6A01G090000.1	Wheat	mitochondrion	28.99	25.21
HORVU2Hr1G077990.2	Barley	plastid	30.62	25.13
TraesCS7D01G555100.1	Wheat	cytosol	27.36	25.07
TraesCS6A01G089600.1	Wheat	cytosol, mitochondrion	27.69	24.93
TraesCS5B01G284300.1	Wheat	cytosol	27.69	24.71
TraesCS4D01G274100.1	Wheat	cytosol	11.4	24.65
OQU80174	Sorghum	cytosol	10.42	23.88
EES14677	Sorghum	cytosol, mitochondrion, nucleus, plastid	36.16	23.62
TraesCS6B01G112000.1	Wheat	mitochondrion	26.06	23.19
Os08t0193300-00	Rice	cytosol	25.08	23.12
TraesCS6B01G067500.1	Wheat	cytosol, extracellular	17.92	22.63
TraesCS6B01G310200.1	Wheat	plastid	26.38	22.44
TraesCSU01G016600.1	Wheat	mitochondrion	18.89	21.48
Solyc08g006920.1.1	Tomato	cytosol, mitochondrion, nucleus	21.17	21.45
TraesCS3B01G452400.1	Wheat	cytosol	30.94	21.35
Os08t0195900-00	Rice	cytosol, mitochondrion, nucleus, plastid	20.85	21.19
TraesCS3D01G413000.1	Wheat	cytosol	29.97	21.0
HORVU6Hr1G070700.2	Barley	mitochondrion	27.04	20.96
Os08t0195000-00	Rice	cytosol, peroxisome, plastid	16.94	20.8
TraesCS3D01G412900.1	Wheat	cytosol, plastid	31.6	20.73
TraesCS3B01G452300.1	Wheat	plastid	31.27	20.65
Os08t0191300-00	Rice	cytosol, golgi	17.26	20.62
TraesCS6A01G051000.1	Wheat	plastid	24.76	20.43
TraesCS3B01G452500.1	Wheat	cytosol	31.27	20.3
HORVU3Hr1G092720.1	Barley	cytosol, mitochondrion, nucleus	31.27	20.25
TraesCS3A01G417500.1	Wheat	cytosol	25.73	20.2
TraesCS3A01G417400.1	Wheat	cytosol	30.94	19.15
HORVU6Hr1G070690.2	Barley	extracellular, mitochondrion, plasma membrane	18.24	18.73
TraesCS5D01G484100.1	Wheat	cytosol	20.52	16.98
Os08t0196200-01	Rice	cytosol	9.77	10.95
Os08t0194000-00	Rice	cytosol, vacuole	1.3	1.06

Protein Annotations

EnsemblPlants:CDY48580	EnsemblPlantsGene:GSBRNA2T00091316001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44078
PANTHER:PTHR44078:SF5	PFAM:PF12937	PFscan:PS50181	ProteinID:CDY48580	ProteinID:CDY48580.1	SMART:SM00256
SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI0004EE35FD	UniProt:A0A078ICH9	MapMan:35.1	:

Description

BnaA09g01760DBnaA09g01760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICH9]

Coordinates

chrLK032779:+:127042..128049

Molecular Weight (calculated)

34668.2 Da

IEP (calculated)

4.560

GRAVY (calculated)

-0.185

Length

307 amino acids

Sequence
(BLAST)

001: MASSSSSGLF PPEPPLFTGE CRSWAELPSE LTSLILRRLG SIDILENAQK VCTSWRRVCK DTAMWRKIDM RNSGDLVLNL EMMCRHAVDR SQGGLVEIDI
101: WHFGTDSLLN YIADRSSNLR SLRLAMCSPI TTDGLTEAIV KLPLLEELEV SYCSLSGESL KIVGQSLPNL KTLKLNRIGF LRPRYESDVD ALAIAETMHG
201: LRFLQLFGNI LTNGGLNAIL DNCPDLVHLD LRFYFNVYNV GDLITRLCSE KIKVLRLPYD STDDYPYAGN YYDIDSSDED SPWPLMAAND YYHSFAGYSD
301: HSDDDYY

Best Arabidopsis Sequence Match ( AT4G05460.1 )
(BLAST)

001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF

Arabidopsis Description

SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.